Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
EPHA4P54764 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
EPHA4P54764 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EPHA4P54764 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.01■□□□□ 0.95
EPHA4P54764 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
EPHA4P54764 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.01■□□□□ 0.95
EPHA4P54764 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EPHA4P54764 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EPHA4P54764 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21■□□□□ 0.95
EPHA4P54764 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
EPHA4P54764 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21■□□□□ 0.95
EPHA4P54764 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21■□□□□ 0.95
EPHA4P54764 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21■□□□□ 0.95
EPHA4P54764 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21■□□□□ 0.95
EPHA4P54764 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21■□□□□ 0.95
EPHA4P54764 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
EPHA4P54764 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21■□□□□ 0.95
EPHA4P54764 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21■□□□□ 0.95
EPHA4P54764 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21■□□□□ 0.95
EPHA4P54764 IKBKGP1-201ENST00000612193 1073 ntBASIC21■□□□□ 0.95
EPHA4P54764 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21■□□□□ 0.95
EPHA4P54764 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21■□□□□ 0.95
EPHA4P54764 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
EPHA4P54764 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EPHA4P54764 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA4P54764 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA4P54764 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA4P54764 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
EPHA4P54764 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
EPHA4P54764 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA4P54764 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.99■□□□□ 0.95
EPHA4P54764 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.99■□□□□ 0.95
EPHA4P54764 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
EPHA4P54764 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.99■□□□□ 0.95
EPHA4P54764 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.99■□□□□ 0.95
EPHA4P54764 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.99■□□□□ 0.95
EPHA4P54764 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.99■□□□□ 0.95
EPHA4P54764 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA4P54764 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EPHA4P54764 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.99■□□□□ 0.95
EPHA4P54764 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.99■□□□□ 0.95
EPHA4P54764 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
EPHA4P54764 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
EPHA4P54764 LINC01960-201ENST00000563759 1884 ntBASIC20.98■□□□□ 0.95
EPHA4P54764 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA4P54764 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.98■□□□□ 0.95
EPHA4P54764 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.98■□□□□ 0.95
EPHA4P54764 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.98■□□□□ 0.95
EPHA4P54764 AC092437.1-201ENST00000624794 1048 ntBASIC20.98■□□□□ 0.95
EPHA4P54764 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.98■□□□□ 0.95
EPHA4P54764 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA4P54764 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA4P54764 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
EPHA4P54764 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA4P54764 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.98■□□□□ 0.95
EPHA4P54764 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EPHA4P54764 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.97■□□□□ 0.95
EPHA4P54764 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA4P54764 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA4P54764 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
EPHA4P54764 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA4P54764 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA4P54764 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA4P54764 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.97■□□□□ 0.95
EPHA4P54764 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
EPHA4P54764 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA4P54764 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
EPHA4P54764 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHA4P54764 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHA4P54764 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHA4P54764 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHA4P54764 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.96■□□□□ 0.95
EPHA4P54764 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.96■□□□□ 0.95
EPHA4P54764 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.96■□□□□ 0.95
EPHA4P54764 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHA4P54764 AC009237.3-201ENST00000393279 1427 ntBASIC20.95■□□□□ 0.95
EPHA4P54764 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
EPHA4P54764 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA4P54764 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA4P54764 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA4P54764 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHA4P54764 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
EPHA4P54764 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.95■□□□□ 0.94
EPHA4P54764 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.95■□□□□ 0.94
EPHA4P54764 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHA4P54764 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA4P54764 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA4P54764 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA4P54764 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA4P54764 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
EPHA4P54764 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.95■□□□□ 0.94
EPHA4P54764 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA4P54764 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHA4P54764 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
EPHA4P54764 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
EPHA4P54764 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA4P54764 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA4P54764 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA4P54764 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHA4P54764 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms