Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1aP43275 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hist1h1aP43275 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hist1h1aP43275 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hist1h1aP43275 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.84■□□□□ 0.13
Hist1h1aP43275 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.84■□□□□ 0.13
Hist1h1aP43275 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hist1h1aP43275 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hist1h1aP43275 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hist1h1aP43275 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hist1h1aP43275 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Hist1h1aP43275 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hist1h1aP43275 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Hist1h1aP43275 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hist1h1aP43275 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hist1h1aP43275 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hist1h1aP43275 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hist1h1aP43275 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hist1h1aP43275 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hist1h1aP43275 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Hist1h1aP43275 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hist1h1aP43275 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hist1h1aP43275 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hist1h1aP43275 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hist1h1aP43275 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Hist1h1aP43275 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hist1h1aP43275 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms