Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 MET17YLR303W 1335 nt3.37□□□□□ -1.87
CDC40P40968 YPR148CYPR148C 1308 nt3.37□□□□□ -1.87
CDC40P40968 LCB5YLR260W 2064 nt3.37□□□□□ -1.87
CDC40P40968 PPZ1YML016C 2079 nt3.37□□□□□ -1.87
CDC40P40968 RPN2YIL075C 2838 nt3.36□□□□□ -1.87
CDC40P40968 YMR221CYMR221C 1515 nt3.36□□□□□ -1.87
CDC40P40968 CPR4YCR069W 957 nt3.36□□□□□ -1.87
CDC40P40968 YFT2YDR319C 825 nt3.36□□□□□ -1.87
CDC40P40968 YJR096WYJR096W 849 nt3.36□□□□□ -1.87
CDC40P40968 IDP2YLR174W 1239 nt3.36□□□□□ -1.87
CDC40P40968 MRPL39YML009C 213 nt3.36□□□□□ -1.87
CDC40P40968 YIF1YNL263C 945 nt3.36□□□□□ -1.87
CDC40P40968 PST1YDR055W 1335 nt3.36□□□□□ -1.87
CDC40P40968 PRM1YNL279W 1986 nt3.36□□□□□ -1.87
CDC40P40968 ARO1YDR127W 4767 nt3.35□□□□□ -1.87
CDC40P40968 YPL109CYPL109C 1974 nt3.35□□□□□ -1.87
CDC40P40968 GRX3YDR098C 858 nt3.35□□□□□ -1.87
CDC40P40968 BSC2YDR275W 708 nt3.35□□□□□ -1.87
CDC40P40968 PAD1YDR538W 729 nt3.35□□□□□ -1.87
CDC40P40968 YEL032C-AYEL032C-A 162 nt3.35□□□□□ -1.87
CDC40P40968 tQ(UUG)CtQ(UUG)C 72 nt3.35□□□□□ -1.87
CDC40P40968 tQ(UUG)D1tQ(UUG)D1 72 nt3.35□□□□□ -1.87
CDC40P40968 tQ(UUG)D2tQ(UUG)D2 72 nt3.35□□□□□ -1.87
CDC40P40968 tQ(UUG)D3tQ(UUG)D3 72 nt3.35□□□□□ -1.87
CDC40P40968 tQ(UUG)E1tQ(UUG)E1 72 nt3.35□□□□□ -1.87
CDC40P40968 SAY1YGR263C 1275 nt3.35□□□□□ -1.87
CDC40P40968 tQ(UUG)HtQ(UUG)H 72 nt3.35□□□□□ -1.87
CDC40P40968 tQ(UUG)LtQ(UUG)L 72 nt3.35□□□□□ -1.87
CDC40P40968 tR(ACG)JtR(ACG)J 73 nt3.35□□□□□ -1.87
CDC40P40968 POG1YIL122W 1056 nt3.35□□□□□ -1.87
CDC40P40968 RPL14AYKL006W 417 nt3.35□□□□□ -1.87
CDC40P40968 IES3YLR052W 753 nt3.35□□□□□ -1.87
CDC40P40968 REX3YLR107W 1215 nt3.35□□□□□ -1.87
CDC40P40968 SIW14YNL032W 846 nt3.35□□□□□ -1.87
CDC40P40968 NIS1YNL078W 1224 nt3.35□□□□□ -1.87
CDC40P40968 YSA1YBR111C 696 nt3.35□□□□□ -1.87
CDC40P40968 CHL1YPL008W 2586 nt3.35□□□□□ -1.87
CDC40P40968 MYO3YKL129C 3819 nt3.35□□□□□ -1.87
CDC40P40968 PEX1YKL197C 3132 nt3.35□□□□□ -1.87
CDC40P40968 ETP1YHL010C 1758 nt3.34□□□□□ -1.87
CDC40P40968 YCR075W-AYCR075W-A 228 nt3.34□□□□□ -1.87
CDC40P40968 YDR222WYDR222W 1248 nt3.34□□□□□ -1.87
CDC40P40968 ERP1YAR002C-A 660 nt3.34□□□□□ -1.87
CDC40P40968 SUI1YNL244C 327 nt3.34□□□□□ -1.87
CDC40P40968 DIB1YPR082C 432 nt3.34□□□□□ -1.87
CDC40P40968 SYT1YPR095C 3681 nt3.34□□□□□ -1.88
CDC40P40968 CBF5YLR175W 1452 nt3.34□□□□□ -1.88
CDC40P40968 SUC2YIL162W 1599 nt3.34□□□□□ -1.88
CDC40P40968 TRM1YDR120C 1713 nt3.33□□□□□ -1.88
CDC40P40968 SWI3YJL176C 2478 nt3.33□□□□□ -1.88
CDC40P40968 ACK1YDL203C 1872 nt3.33□□□□□ -1.88
CDC40P40968 ZDS1YMR273C 2748 nt3.33□□□□□ -1.88
CDC40P40968 PCL2YDL127W 927 nt3.33□□□□□ -1.88
CDC40P40968 CTH1YDR151C 978 nt3.33□□□□□ -1.88
CDC40P40968 RPL24AYGL031C 468 nt3.33□□□□□ -1.88
CDC40P40968 CIR1YGR207C 786 nt3.33□□□□□ -1.88
CDC40P40968 IAH1YOR126C 717 nt3.33□□□□□ -1.88
CDC40P40968 FEX1YOR390W 1128 nt3.33□□□□□ -1.88
CDC40P40968 YPL162CYPL162C 822 nt3.33□□□□□ -1.88
CDC40P40968 FEX2YPL279C 1128 nt3.33□□□□□ -1.88
CDC40P40968 MRPS9YBR146W 837 nt3.33□□□□□ -1.88
CDC40P40968 GDT1YBR187W 843 nt3.33□□□□□ -1.88
CDC40P40968 FYV5YCL058C 459 nt3.33□□□□□ -1.88
CDC40P40968 MSS4YDR208W 2340 nt3.33□□□□□ -1.88
CDC40P40968 SEC59YMR013C 1560 nt3.33□□□□□ -1.88
CDC40P40968 NCR1YPL006W 3513 nt3.32□□□□□ -1.88
CDC40P40968 YOR365CYOR365C 2112 nt3.32□□□□□ -1.88
CDC40P40968 SEA4YBL104C 3117 nt3.32□□□□□ -1.88
CDC40P40968 RRP8YDR083W 1179 nt3.32□□□□□ -1.88
CDC40P40968 YOS1YER074W-A 258 nt3.32□□□□□ -1.88
CDC40P40968 TYW3YGL050W 822 nt3.32□□□□□ -1.88
CDC40P40968 IRC18YJL037W 675 nt3.32□□□□□ -1.88
CDC40P40968 MRPL49YJL096W 486 nt3.32□□□□□ -1.88
CDC40P40968 SOP4YJL192C 705 nt3.32□□□□□ -1.88
CDC40P40968 YJR112W-AYJR112W-A 330 nt3.32□□□□□ -1.88
CDC40P40968 CNB1YKL190W 528 nt3.32□□□□□ -1.88
CDC40P40968 PFA4YOL003C 1137 nt3.32□□□□□ -1.88
CDC40P40968 YOR082CYOR082C 342 nt3.32□□□□□ -1.88
CDC40P40968 POS5YPL188W 1245 nt3.32□□□□□ -1.88
CDC40P40968 OXR1YPL196W 822 nt3.32□□□□□ -1.88
CDC40P40968 YPR071WYPR071W 636 nt3.32□□□□□ -1.88
CDC40P40968 BAR1YIL015W 1764 nt3.32□□□□□ -1.88
CDC40P40968 HCA4YJL033W 2313 nt3.32□□□□□ -1.88
CDC40P40968 MCM7YBR202W 2538 nt3.32□□□□□ -1.88
CDC40P40968 SWH1YAR042W 3567 nt3.32□□□□□ -1.88
CDC40P40968 ALG6YOR002W 1635 nt3.31□□□□□ -1.88
CDC40P40968 STP1YDR463W 1560 nt3.31□□□□□ -1.88
CDC40P40968 MIG1YGL035C 1515 nt3.31□□□□□ -1.88
CDC40P40968 AVT7YIL088C 1473 nt3.31□□□□□ -1.88
CDC40P40968 TRM12YML005W 1389 nt3.31□□□□□ -1.88
CDC40P40968 RPS29BYDL061C 171 nt3.31□□□□□ -1.88
CDC40P40968 SAP30YMR263W 606 nt3.31□□□□□ -1.88
CDC40P40968 SEC15YGL233W 2733 nt3.3□□□□□ -1.88
CDC40P40968 ACA1YER045C 1470 nt3.3□□□□□ -1.88
CDC40P40968 NTA1YJR062C 1374 nt3.3□□□□□ -1.88
CDC40P40968 YDL027CYDL027C 1263 nt3.3□□□□□ -1.88
CDC40P40968 FRQ1YDR373W 573 nt3.3□□□□□ -1.88
CDC40P40968 BMH1YER177W 804 nt3.3□□□□□ -1.88
CDC40P40968 AML1YGR001C 747 nt3.3□□□□□ -1.88
CDC40P40968 YIL171WYIL171W 330 nt3.3□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms