Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rpl3P27659 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl3P27659 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.27■□□□□ 0.52
Rpl3P27659 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpl3P27659 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpl3P27659 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpl3P27659 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.27■□□□□ 0.52
Rpl3P27659 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Rpl3P27659 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpl3P27659 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpl3P27659 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rpl3P27659 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rpl3P27659 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpl3P27659 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl3P27659 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl3P27659 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl3P27659 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl3P27659 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Rpl3P27659 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.26■□□□□ 0.51
Rpl3P27659 Spcs1-204ENSMUST00000226782 949 ntBASIC18.26■□□□□ 0.51
Rpl3P27659 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.26■□□□□ 0.51
Rpl3P27659 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl3P27659 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl3P27659 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl3P27659 Iqck-206ENSMUST00000208658 2891 ntBASIC18.25■□□□□ 0.51
Rpl3P27659 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl3P27659 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.25■□□□□ 0.51
Rpl3P27659 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl3P27659 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl3P27659 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl3P27659 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.25■□□□□ 0.51
Rpl3P27659 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl3P27659 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl3P27659 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl3P27659 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rpl3P27659 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl3P27659 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rpl3P27659 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl3P27659 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rpl3P27659 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.24■□□□□ 0.51
Rpl3P27659 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.24■□□□□ 0.51
Rpl3P27659 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.24■□□□□ 0.51
Rpl3P27659 Gm13241-201ENSMUST00000094493 780 ntBASIC18.24■□□□□ 0.51
Rpl3P27659 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl3P27659 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl3P27659 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl3P27659 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rpl3P27659 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl3P27659 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl3P27659 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl3P27659 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rpl3P27659 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl3P27659 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rpl3P27659 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl3P27659 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl3P27659 Gm43137-201ENSMUST00000198052 594 ntBASIC18.23■□□□□ 0.51
Rpl3P27659 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.23■□□□□ 0.51
Rpl3P27659 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl3P27659 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Rpl3P27659 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rpl3P27659 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Rpl3P27659 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl3P27659 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl3P27659 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rpl3P27659 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl3P27659 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl3P27659 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl3P27659 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl3P27659 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
Rpl3P27659 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl3P27659 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl3P27659 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rpl3P27659 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl3P27659 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rpl3P27659 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl3P27659 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl3P27659 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl3P27659 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl3P27659 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl3P27659 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl3P27659 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rpl3P27659 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl3P27659 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rpl3P27659 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl3P27659 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rpl3P27659 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rpl3P27659 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.21■□□□□ 0.51
Rpl3P27659 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rpl3P27659 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Rpl3P27659 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl3P27659 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl3P27659 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl3P27659 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl3P27659 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.2■□□□□ 0.5
Rpl3P27659 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl3P27659 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl3P27659 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl3P27659 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Rpl3P27659 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl3P27659 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms