Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 OXCT2P1-201ENST00000447263 1535 ntBASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 AC004911.1-201ENST00000416316 871 ntBASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 SMUG1P1-201ENST00000590640 811 ntBASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB40ALP0C0E4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB40ALP0C0E4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAB40ALP0C0E4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 AC079834.2-201ENST00000609776 1949 ntBASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
RAB40ALP0C0E4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAB40ALP0C0E4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 DUSP8P5-201ENST00000422884 1815 ntBASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAB40ALP0C0E4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
RAB40ALP0C0E4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.48■□□□□ 0.87
RAB40ALP0C0E4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.48■□□□□ 0.87
RAB40ALP0C0E4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.48■□□□□ 0.87
RAB40ALP0C0E4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms