Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Gm8493-201ENSMUST00000196881 489 ntBASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igh-VJ558P01758 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Igh-VJ558P01758 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Igh-VJ558P01758 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Igh-VJ558P01758 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Igh-VJ558P01758 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Gm6139-201ENSMUST00000079261 882 ntBASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igh-VJ558P01758 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igh-VJ558P01758 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igh-VJ558P01758 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Igh-VJ558P01758 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igh-VJ558P01758 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Igh-VJ558P01758 Gm45417-201ENSMUST00000209533 758 ntBASIC16.69■□□□□ 0.26
Igh-VJ558P01758 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.69■□□□□ 0.26
Igh-VJ558P01758 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igh-VJ558P01758 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igh-VJ558P01758 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igh-VJ558P01758 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igh-VJ558P01758 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igh-VJ558P01758 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.67■□□□□ 0.26
Igh-VJ558P01758 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igh-VJ558P01758 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igh-VJ558P01758 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igh-VJ558P01758 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igh-VJ558P01758 Gm11421-201ENSMUST00000122124 294 ntBASIC16.67■□□□□ 0.26
Igh-VJ558P01758 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Igh-VJ558P01758 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.67■□□□□ 0.26
Igh-VJ558P01758 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igh-VJ558P01758 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igh-VJ558P01758 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igh-VJ558P01758 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms