Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pkd1O08852 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pkd1O08852 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pkd1O08852 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pkd1O08852 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.43□□□□□ -0.42
Pkd1O08852 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pkd1O08852 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pkd1O08852 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pkd1O08852 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pkd1O08852 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pkd1O08852 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pkd1O08852 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pkd1O08852 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.43□□□□□ -0.42
Pkd1O08852 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Pkd1O08852 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pkd1O08852 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pkd1O08852 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pkd1O08852 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.42□□□□□ -0.42
Pkd1O08852 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.42□□□□□ -0.42
Pkd1O08852 Gm43909-201ENSMUST00000203443 1876 ntBASIC12.42□□□□□ -0.42
Pkd1O08852 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pkd1O08852 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Pkd1O08852 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.42□□□□□ -0.42
Pkd1O08852 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.42□□□□□ -0.42
Pkd1O08852 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pkd1O08852 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pkd1O08852 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pkd1O08852 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.42□□□□□ -0.42
Pkd1O08852 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.42□□□□□ -0.42
Pkd1O08852 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pkd1O08852 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pkd1O08852 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pkd1O08852 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pkd1O08852 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pkd1O08852 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pkd1O08852 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pkd1O08852 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.41□□□□□ -0.42
Pkd1O08852 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pkd1O08852 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pkd1O08852 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Pkd1O08852 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pkd1O08852 Gm21362-201ENSMUST00000194272 928 ntBASIC12.41□□□□□ -0.42
Pkd1O08852 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pkd1O08852 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pkd1O08852 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pkd1O08852 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pkd1O08852 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pkd1O08852 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pkd1O08852 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Pkd1O08852 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pkd1O08852 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pkd1O08852 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pkd1O08852 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pkd1O08852 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pkd1O08852 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pkd1O08852 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.4□□□□□ -0.42
Pkd1O08852 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.4□□□□□ -0.42
Pkd1O08852 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pkd1O08852 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Pkd1O08852 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pkd1O08852 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pkd1O08852 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pkd1O08852 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC12.4□□□□□ -0.43
Pkd1O08852 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pkd1O08852 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Pkd1O08852 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.39□□□□□ -0.43
Pkd1O08852 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.39□□□□□ -0.43
Pkd1O08852 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.39□□□□□ -0.43
Pkd1O08852 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.39□□□□□ -0.43
Pkd1O08852 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.39□□□□□ -0.43
Pkd1O08852 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Pkd1O08852 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pkd1O08852 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Gm10231-201ENSMUST00000181584 441 ntBASIC12.39□□□□□ -0.43
Pkd1O08852 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.39□□□□□ -0.43
Pkd1O08852 Gm10175-202ENSMUST00000208752 441 ntBASIC12.39□□□□□ -0.43
Pkd1O08852 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pkd1O08852 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.39□□□□□ -0.43
Pkd1O08852 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.39□□□□□ -0.43
Pkd1O08852 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pkd1O08852 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.38□□□□□ -0.43
Pkd1O08852 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pkd1O08852 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pkd1O08852 Gm26766-202ENSMUST00000227544 2347 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms