Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.04■□□□□ 0.8
CPSF4LA6NMK7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 AL499627.2-201ENST00000606283 725 ntBASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPSF4LA6NMK7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 AL035685.1-201ENST00000636663 812 ntBASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.02■□□□□ 0.8
CPSF4LA6NMK7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.02■□□□□ 0.79
CPSF4LA6NMK7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.02■□□□□ 0.79
CPSF4LA6NMK7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.02■□□□□ 0.79
CPSF4LA6NMK7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CPSF4LA6NMK7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CPSF4LA6NMK7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.01■□□□□ 0.79
CPSF4LA6NMK7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF4LA6NMK7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF4LA6NMK7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPSF4LA6NMK7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.01■□□□□ 0.79
CPSF4LA6NMK7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF4LA6NMK7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20■□□□□ 0.79
CPSF4LA6NMK7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF4LA6NMK7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPSF4LA6NMK7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF4LA6NMK7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CPSF4LA6NMK7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF4LA6NMK7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF4LA6NMK7 CA15P2-201ENST00000611168 834 ntBASIC20■□□□□ 0.79
CPSF4LA6NMK7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPSF4LA6NMK7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20■□□□□ 0.79
CPSF4LA6NMK7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CPSF4LA6NMK7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20■□□□□ 0.79
CPSF4LA6NMK7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CPSF4LA6NMK7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 AC241377.3-202ENST00000626088 1088 ntBASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 AC241585.3-202ENST00000628937 1088 ntBASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 AC245100.8-202ENST00000629247 1058 ntBASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CPSF4LA6NMK7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 AC006455.2-201ENST00000429931 906 ntBASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.98■□□□□ 0.79
CPSF4LA6NMK7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 AC010542.4-201ENST00000563151 1910 ntBASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CPSF4LA6NMK7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.96■□□□□ 0.79
CPSF4LA6NMK7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CPSF4LA6NMK7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms