Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC41.28■■■■■ 4.2
Gm35339A0A140LHH9 AL672049.1-201ENSMUST00000197943 91 ntBASIC41.28■■■■■ 4.2
Gm35339A0A140LHH9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC41.28■■■■■ 4.2
Gm35339A0A140LHH9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC41.28■■■■■ 4.2
Gm35339A0A140LHH9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
Gm35339A0A140LHH9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC41.28■■■■■ 4.2
Gm35339A0A140LHH9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
Gm35339A0A140LHH9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC41.28■■■■■ 4.2
Gm35339A0A140LHH9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC41.27■■■■■ 4.2
Gm35339A0A140LHH9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC41.27■■■■■ 4.2
Gm35339A0A140LHH9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC41.27■■■■■ 4.2
Gm35339A0A140LHH9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC41.26■■■■■ 4.2
Gm35339A0A140LHH9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.2
Gm35339A0A140LHH9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC41.26■■■■■ 4.19
Gm35339A0A140LHH9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC41.26■■■■■ 4.19
Gm35339A0A140LHH9 AC154649.1-201ENSMUST00000227392 384 ntBASIC41.26■■■■■ 4.19
Gm35339A0A140LHH9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC41.26■■■■■ 4.19
Gm35339A0A140LHH9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC41.25■■■■■ 4.19
Gm35339A0A140LHH9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC41.25■■■■■ 4.19
Gm35339A0A140LHH9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC41.25■■■■■ 4.19
Gm35339A0A140LHH9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC41.25■■■■■ 4.19
Gm35339A0A140LHH9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC41.25■■■■■ 4.19
Gm35339A0A140LHH9 Gm6802-201ENSMUST00000167843 1983 ntBASIC41.24■■■■■ 4.19
Gm35339A0A140LHH9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC41.24■■■■■ 4.19
Gm35339A0A140LHH9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC41.24■■■■■ 4.19
Gm35339A0A140LHH9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC41.24■■■■■ 4.19
Gm35339A0A140LHH9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC41.24■■■■■ 4.19
Gm35339A0A140LHH9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC41.24■■■■■ 4.19
Gm35339A0A140LHH9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC41.23■■■■■ 4.19
Gm35339A0A140LHH9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC41.23■■■■■ 4.19
Gm35339A0A140LHH9 Gm2399-201ENSMUST00000104944 225 ntBASIC41.23■■■■■ 4.19
Gm35339A0A140LHH9 Gm18666-201ENSMUST00000190039 958 ntBASIC41.23■■■■■ 4.19
Gm35339A0A140LHH9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC41.23■■■■■ 4.19
Gm35339A0A140LHH9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC41.22■■■■■ 4.19
Gm35339A0A140LHH9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC41.22■■■■■ 4.19
Gm35339A0A140LHH9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC41.22■■■■■ 4.19
Gm35339A0A140LHH9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC41.22■■■■■ 4.19
Gm35339A0A140LHH9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC41.22■■■■■ 4.19
Gm35339A0A140LHH9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC41.22■■■■■ 4.19
Gm35339A0A140LHH9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC41.22■■■■■ 4.19
Gm35339A0A140LHH9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC41.22■■■■■ 4.19
Gm35339A0A140LHH9 Gm44549-201ENSMUST00000208351 577 ntBASIC41.21■■■■■ 4.19
Gm35339A0A140LHH9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
Gm35339A0A140LHH9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC41.21■■■■■ 4.19
Gm35339A0A140LHH9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
Gm35339A0A140LHH9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC41.2■■■■■ 4.19
Gm35339A0A140LHH9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
Gm35339A0A140LHH9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC41.19■■■■■ 4.19
Gm35339A0A140LHH9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC41.19■■■■■ 4.19
Gm35339A0A140LHH9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC41.19■■■■■ 4.18
Gm35339A0A140LHH9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC41.19■■■■■ 4.18
Gm35339A0A140LHH9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC41.19■■■■■ 4.18
Gm35339A0A140LHH9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
Gm35339A0A140LHH9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC41.17■■■■■ 4.18
Gm35339A0A140LHH9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC41.17■■■■■ 4.18
Gm35339A0A140LHH9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC41.17■■■■■ 4.18
Gm35339A0A140LHH9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
Gm35339A0A140LHH9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC41.16■■■■■ 4.18
Gm35339A0A140LHH9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
Gm35339A0A140LHH9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
Gm35339A0A140LHH9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
Gm35339A0A140LHH9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC41.16■■■■■ 4.18
Gm35339A0A140LHH9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC41.15■■■■■ 4.18
Gm35339A0A140LHH9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC41.15■■■■■ 4.18
Gm35339A0A140LHH9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC41.15■■■■■ 4.18
Gm35339A0A140LHH9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC41.15■■■■■ 4.18
Gm35339A0A140LHH9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC41.15■■■■■ 4.18
Gm35339A0A140LHH9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC41.15■■■■■ 4.18
Gm35339A0A140LHH9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC41.14■■■■■ 4.18
Gm35339A0A140LHH9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC41.14■■■■■ 4.18
Gm35339A0A140LHH9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC41.14■■■■■ 4.18
Gm35339A0A140LHH9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC41.14■■■■■ 4.18
Gm35339A0A140LHH9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC41.14■■■■■ 4.18
Gm35339A0A140LHH9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC41.13■■■■■ 4.18
Gm35339A0A140LHH9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.18
Gm35339A0A140LHH9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC41.13■■■■■ 4.17
Gm35339A0A140LHH9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.17
Gm35339A0A140LHH9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC41.13■■■■■ 4.17
Gm35339A0A140LHH9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC41.12■■■■■ 4.17
Gm35339A0A140LHH9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC41.12■■■■■ 4.17
Gm35339A0A140LHH9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC41.12■■■■■ 4.17
Gm35339A0A140LHH9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 AC153881.2-201ENSMUST00000214877 204 ntBASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
Gm35339A0A140LHH9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC41.1■■■■■ 4.17
Gm35339A0A140LHH9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC41.1■■■■■ 4.17
Gm35339A0A140LHH9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC41.1■■■■■ 4.17
Gm35339A0A140LHH9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC41.09■■■■■ 4.17
Gm35339A0A140LHH9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
Gm35339A0A140LHH9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
Gm35339A0A140LHH9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC41.09■■■■■ 4.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms