Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
TRAV12-3A0A0B4J271 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-3A0A0B4J271 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-3A0A0B4J271 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 C11orf96-202ENST00000528572 1834 ntBASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 CLDN5-201ENST00000403084 2357 ntBASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 GUSBP5-201ENST00000418136 578 ntBASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 AL356740.2-201ENST00000601559 647 ntBASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV12-3A0A0B4J271 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 AC241377.3-202ENST00000626088 1088 ntBASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 AC241585.3-202ENST00000628937 1088 ntBASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 AC245100.8-202ENST00000629247 1058 ntBASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-3A0A0B4J271 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV12-3A0A0B4J271 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms