Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.2■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Igkv4-50A0A0B4J1J0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.2■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.18■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv4-50A0A0B4J1J0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.18■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Mir7075-201ENSMUST00000184187 82 ntBASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Igkv4-50A0A0B4J1J0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Gm12821-201ENSMUST00000120022 600 ntBASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-50A0A0B4J1J0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-50A0A0B4J1J0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms