Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6d-5A0A075B6B9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6d-5A0A075B6B9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6d-5A0A075B6B9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Mir6538-201ENSMUST00000183713 110 ntBASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.57■□□□□ 0.08
Trav6d-5A0A075B6B9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Rarb-207ENSMUST00000225921 2756 ntBASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav6d-5A0A075B6B9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm13238-201ENSMUST00000117655 780 ntBASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6d-5A0A075B6B9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6d-5A0A075B6B9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms