Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav12d-3A0A075B6A4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-3A0A075B6A4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-3A0A075B6A4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.43□□□□□ -0.1
Trav12d-3A0A075B6A4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.43□□□□□ -0.1
Trav12d-3A0A075B6A4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-3A0A075B6A4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-3A0A075B6A4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-3A0A075B6A4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.43□□□□□ -0.1
Trav12d-3A0A075B6A4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav12d-3A0A075B6A4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12d-3A0A075B6A4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav12d-3A0A075B6A4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-3A0A075B6A4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.41□□□□□ -0.1
Trav12d-3A0A075B6A4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-3A0A075B6A4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-3A0A075B6A4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12d-3A0A075B6A4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.41□□□□□ -0.1
Trav12d-3A0A075B6A4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav12d-3A0A075B6A4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12d-3A0A075B6A4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12d-3A0A075B6A4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms