Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRTM1Q9HBL6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRTM1Q9HBL6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRTM1Q9HBL6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRTM1Q9HBL6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
LRTM1Q9HBL6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 FBXW4P1-201ENST00000426721 2239 ntBASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 KRT16P3-201ENST00000439127 1283 ntBASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRTM1Q9HBL6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 AC241377.3-202ENST00000626088 1088 ntBASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 AC241585.3-202ENST00000628937 1088 ntBASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 AC245100.8-202ENST00000629247 1058 ntBASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM1Q9HBL6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 AC007375.3-201ENST00000600936 2314 ntBASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.95■□□□□ 0.94
LRTM1Q9HBL6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.94■□□□□ 0.94
LRTM1Q9HBL6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM1Q9HBL6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM1Q9HBL6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
LRTM1Q9HBL6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM1Q9HBL6 AL035685.1-201ENST00000636663 812 ntBASIC20.93■□□□□ 0.94
LRTM1Q9HBL6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.93■□□□□ 0.94
LRTM1Q9HBL6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM1Q9HBL6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM1Q9HBL6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM1Q9HBL6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRTM1Q9HBL6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.92■□□□□ 0.94
LRTM1Q9HBL6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.92■□□□□ 0.94
LRTM1Q9HBL6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRTM1Q9HBL6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRTM1Q9HBL6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRTM1Q9HBL6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.92■□□□□ 0.94
LRTM1Q9HBL6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRTM1Q9HBL6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRTM1Q9HBL6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.91■□□□□ 0.94
LRTM1Q9HBL6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
LRTM1Q9HBL6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
LRTM1Q9HBL6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.91■□□□□ 0.94
LRTM1Q9HBL6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LRTM1Q9HBL6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRTM1Q9HBL6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRTM1Q9HBL6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRTM1Q9HBL6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRTM1Q9HBL6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.9■□□□□ 0.94
LRTM1Q9HBL6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRTM1Q9HBL6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms