Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
VPS16Q9H269 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS16Q9H269 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS16Q9H269 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS16Q9H269 AC010542.4-201ENST00000563151 1910 ntBASIC23.95■■□□□ 1.42
VPS16Q9H269 AL451085.2-201ENST00000605085 799 ntBASIC23.95■■□□□ 1.42
VPS16Q9H269 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.95■■□□□ 1.42
VPS16Q9H269 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS16Q9H269 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS16Q9H269 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.94■■□□□ 1.42
VPS16Q9H269 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.94■■□□□ 1.42
VPS16Q9H269 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS16Q9H269 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS16Q9H269 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS16Q9H269 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS16Q9H269 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS16Q9H269 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
VPS16Q9H269 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.93■■□□□ 1.42
VPS16Q9H269 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS16Q9H269 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS16Q9H269 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS16Q9H269 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS16Q9H269 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS16Q9H269 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS16Q9H269 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS16Q9H269 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS16Q9H269 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS16Q9H269 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
VPS16Q9H269 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS16Q9H269 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS16Q9H269 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS16Q9H269 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
VPS16Q9H269 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS16Q9H269 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
VPS16Q9H269 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS16Q9H269 FAM99A-202ENST00000538190 1989 ntBASIC23.92■■□□□ 1.42
VPS16Q9H269 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS16Q9H269 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.92■■□□□ 1.42
VPS16Q9H269 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
VPS16Q9H269 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS16Q9H269 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS16Q9H269 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS16Q9H269 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
VPS16Q9H269 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.91■■□□□ 1.42
VPS16Q9H269 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS16Q9H269 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VPS16Q9H269 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS16Q9H269 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS16Q9H269 UNC93B8-201ENST00000511903 705 ntBASIC23.91■■□□□ 1.42
VPS16Q9H269 CA15P2-201ENST00000611168 834 ntBASIC23.91■■□□□ 1.42
VPS16Q9H269 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS16Q9H269 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS16Q9H269 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.91■■□□□ 1.42
VPS16Q9H269 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
VPS16Q9H269 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.9■■□□□ 1.42
VPS16Q9H269 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
VPS16Q9H269 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VPS16Q9H269 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VPS16Q9H269 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS16Q9H269 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
VPS16Q9H269 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS16Q9H269 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VPS16Q9H269 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VPS16Q9H269 AC026310.3-201ENST00000625186 2373 ntBASIC23.89■■□□□ 1.42
VPS16Q9H269 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
VPS16Q9H269 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
VPS16Q9H269 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.89■■□□□ 1.42
VPS16Q9H269 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
VPS16Q9H269 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
VPS16Q9H269 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
VPS16Q9H269 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
VPS16Q9H269 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.89■■□□□ 1.41
VPS16Q9H269 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
VPS16Q9H269 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
VPS16Q9H269 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.89■■□□□ 1.41
VPS16Q9H269 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.88■■□□□ 1.41
VPS16Q9H269 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
VPS16Q9H269 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS16Q9H269 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.88■■□□□ 1.41
VPS16Q9H269 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.88■■□□□ 1.41
VPS16Q9H269 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS16Q9H269 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.88■■□□□ 1.41
VPS16Q9H269 AL499627.2-201ENST00000606283 725 ntBASIC23.88■■□□□ 1.41
VPS16Q9H269 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
VPS16Q9H269 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
VPS16Q9H269 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.88■■□□□ 1.41
VPS16Q9H269 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
VPS16Q9H269 PKD1P6-201ENST00000343738 4769 ntBASIC23.88■■□□□ 1.41
VPS16Q9H269 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
VPS16Q9H269 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS16Q9H269 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS16Q9H269 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS16Q9H269 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS16Q9H269 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS16Q9H269 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
VPS16Q9H269 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS16Q9H269 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.87■■□□□ 1.41
VPS16Q9H269 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS16Q9H269 MIR6724-1-201ENST00000616420 92 ntBASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms