Protein–RNA interactions for Protein: Q9CQ02

Commd4, COMM domain-containing protein 4, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd4Q9CQ02 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Commd4Q9CQ02 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Commd4Q9CQ02 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Commd4Q9CQ02 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Commd4Q9CQ02 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Commd4Q9CQ02 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Commd4Q9CQ02 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Commd4Q9CQ02 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Commd4Q9CQ02 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.27■□□□□ 0.36
Commd4Q9CQ02 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Commd4Q9CQ02 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Commd4Q9CQ02 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Commd4Q9CQ02 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.27■□□□□ 0.35
Commd4Q9CQ02 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Commd4Q9CQ02 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Commd4Q9CQ02 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Gm15820-201ENSMUST00000201566 728 ntBASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Commd4Q9CQ02 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Gm7417-201ENSMUST00000192950 473 ntBASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.24■□□□□ 0.35
Commd4Q9CQ02 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Commd4Q9CQ02 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Commd4Q9CQ02 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Commd4Q9CQ02 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Commd4Q9CQ02 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Commd4Q9CQ02 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Commd4Q9CQ02 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Commd4Q9CQ02 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Commd4Q9CQ02 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Commd4Q9CQ02 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Commd4Q9CQ02 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms