Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trem2Q99NH8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.77■□□□□ 0.76
Trem2Q99NH8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trem2Q99NH8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trem2Q99NH8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trem2Q99NH8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trem2Q99NH8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.76■□□□□ 0.75
Trem2Q99NH8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trem2Q99NH8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trem2Q99NH8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trem2Q99NH8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trem2Q99NH8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.75■□□□□ 0.75
Trem2Q99NH8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trem2Q99NH8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trem2Q99NH8 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.74■□□□□ 0.75
Trem2Q99NH8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trem2Q99NH8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.74■□□□□ 0.75
Trem2Q99NH8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trem2Q99NH8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trem2Q99NH8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trem2Q99NH8 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.74■□□□□ 0.75
Trem2Q99NH8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trem2Q99NH8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.74■□□□□ 0.75
Trem2Q99NH8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trem2Q99NH8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trem2Q99NH8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trem2Q99NH8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trem2Q99NH8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trem2Q99NH8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Smad6-203ENSMUST00000179458 273 ntBASIC19.72■□□□□ 0.75
Trem2Q99NH8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trem2Q99NH8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trem2Q99NH8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trem2Q99NH8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trem2Q99NH8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trem2Q99NH8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trem2Q99NH8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Trem2Q99NH8 Mir7075-201ENSMUST00000184187 82 ntBASIC19.71■□□□□ 0.75
Trem2Q99NH8 Gm43173-201ENSMUST00000202246 593 ntBASIC19.71■□□□□ 0.75
Trem2Q99NH8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trem2Q99NH8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trem2Q99NH8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trem2Q99NH8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trem2Q99NH8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trem2Q99NH8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trem2Q99NH8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trem2Q99NH8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trem2Q99NH8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trem2Q99NH8 Gm12821-201ENSMUST00000120022 600 ntBASIC19.7■□□□□ 0.74
Trem2Q99NH8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.7■□□□□ 0.74
Trem2Q99NH8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trem2Q99NH8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trem2Q99NH8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trem2Q99NH8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trem2Q99NH8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.7■□□□□ 0.74
Trem2Q99NH8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trem2Q99NH8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms