Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC091305.1-201ENST00000479476 895 ntBASIC18.27■□□□□ 0.52
CCL13Q99616 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCL13Q99616 CA15P2-201ENST00000611168 834 ntBASIC18.27■□□□□ 0.52
CCL13Q99616 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCL13Q99616 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
CCL13Q99616 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCL13Q99616 RASA4CP-201ENST00000424092 1398 ntBASIC18.27■□□□□ 0.51
CCL13Q99616 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CCL13Q99616 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.27■□□□□ 0.51
CCL13Q99616 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCL13Q99616 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCL13Q99616 AC087742.1-201ENST00000575880 1738 ntBASIC18.26■□□□□ 0.51
CCL13Q99616 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCL13Q99616 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL13Q99616 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL13Q99616 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCL13Q99616 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.26■□□□□ 0.51
CCL13Q99616 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCL13Q99616 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL13Q99616 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL13Q99616 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.26■□□□□ 0.51
CCL13Q99616 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCL13Q99616 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL13Q99616 AC068587.7-201ENST00000641602 218 ntBASIC18.26■□□□□ 0.51
CCL13Q99616 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.26■□□□□ 0.51
CCL13Q99616 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.26■□□□□ 0.51
CCL13Q99616 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCL13Q99616 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL13Q99616 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL13Q99616 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCL13Q99616 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CCL13Q99616 AP005435.1-201ENST00000529293 1178 ntBASIC18.25■□□□□ 0.51
CCL13Q99616 AC087239.1-201ENST00000622671 572 ntBASIC18.25■□□□□ 0.51
CCL13Q99616 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL13Q99616 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.25■□□□□ 0.51
CCL13Q99616 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCL13Q99616 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCL13Q99616 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL13Q99616 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCL13Q99616 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CCL13Q99616 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCL13Q99616 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCL13Q99616 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL13Q99616 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.24■□□□□ 0.51
CCL13Q99616 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL13Q99616 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL13Q99616 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCL13Q99616 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL13Q99616 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCL13Q99616 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL13Q99616 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL13Q99616 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL13Q99616 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL13Q99616 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL13Q99616 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL13Q99616 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL13Q99616 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL13Q99616 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL13Q99616 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL13Q99616 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL13Q99616 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.23■□□□□ 0.51
CCL13Q99616 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCL13Q99616 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCL13Q99616 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL13Q99616 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCL13Q99616 ESRRAP2-201ENST00000418437 1549 ntBASIC18.23■□□□□ 0.51
CCL13Q99616 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CCL13Q99616 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL13Q99616 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCL13Q99616 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 AC010141.3-201ENST00000456659 717 ntBASIC18.22■□□□□ 0.51
CCL13Q99616 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.22■□□□□ 0.51
CCL13Q99616 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCL13Q99616 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCL13Q99616 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL13Q99616 TSPY26P-201ENST00000476365 1326 ntBASIC18.22■□□□□ 0.51
CCL13Q99616 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.22■□□□□ 0.51
CCL13Q99616 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL13Q99616 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL13Q99616 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL13Q99616 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.21■□□□□ 0.51
CCL13Q99616 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CCL13Q99616 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.21■□□□□ 0.51
CCL13Q99616 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.21■□□□□ 0.51
CCL13Q99616 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCL13Q99616 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCL13Q99616 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CCL13Q99616 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCL13Q99616 AC233723.2-201ENST00000623798 2106 ntBASIC18.2■□□□□ 0.5
CCL13Q99616 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCL13Q99616 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms