Protein–RNA interactions for Protein: Q96NR8

RDH12, Retinol dehydrogenase 12, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH12Q96NR8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RDH12Q96NR8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.07■□□□□ 0.8
RDH12Q96NR8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.06■□□□□ 0.8
RDH12Q96NR8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
RDH12Q96NR8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RDH12Q96NR8 LINC01529-204ENST00000636474 1715 ntBASIC20.06■□□□□ 0.8
RDH12Q96NR8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RDH12Q96NR8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RDH12Q96NR8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RDH12Q96NR8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RDH12Q96NR8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RDH12Q96NR8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.05■□□□□ 0.8
RDH12Q96NR8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.05■□□□□ 0.8
RDH12Q96NR8 AL592293.1-201ENST00000502889 1188 ntBASIC20.05■□□□□ 0.8
RDH12Q96NR8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.05■□□□□ 0.8
RDH12Q96NR8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
RDH12Q96NR8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.05■□□□□ 0.8
RDH12Q96NR8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RDH12Q96NR8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RDH12Q96NR8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RDH12Q96NR8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.04■□□□□ 0.8
RDH12Q96NR8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RDH12Q96NR8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RDH12Q96NR8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RDH12Q96NR8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RDH12Q96NR8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.04■□□□□ 0.8
RDH12Q96NR8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RDH12Q96NR8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.04■□□□□ 0.8
RDH12Q96NR8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RDH12Q96NR8 FP325331.1-202ENST00000623531 1380 ntBASIC20.04■□□□□ 0.8
RDH12Q96NR8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RDH12Q96NR8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RDH12Q96NR8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RDH12Q96NR8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.04■□□□□ 0.8
RDH12Q96NR8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RDH12Q96NR8 AF131216.4-201ENST00000638924 1588 ntBASIC20.04■□□□□ 0.8
RDH12Q96NR8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RDH12Q96NR8 AL157384.1-201ENST00000445995 2473 ntBASIC20.03■□□□□ 0.8
RDH12Q96NR8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RDH12Q96NR8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RDH12Q96NR8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RDH12Q96NR8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.03■□□□□ 0.8
RDH12Q96NR8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
RDH12Q96NR8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RDH12Q96NR8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RDH12Q96NR8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RDH12Q96NR8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RDH12Q96NR8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RDH12Q96NR8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.02■□□□□ 0.8
RDH12Q96NR8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RDH12Q96NR8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RDH12Q96NR8 GPX1-201ENST00000419349 1106 ntBASIC20.02■□□□□ 0.8
RDH12Q96NR8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RDH12Q96NR8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RDH12Q96NR8 AC009086.3-201ENST00000623486 1008 ntBASIC20.02■□□□□ 0.8
RDH12Q96NR8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.02■□□□□ 0.8
RDH12Q96NR8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RDH12Q96NR8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RDH12Q96NR8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RDH12Q96NR8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RDH12Q96NR8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RDH12Q96NR8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RDH12Q96NR8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RDH12Q96NR8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.01■□□□□ 0.79
RDH12Q96NR8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RDH12Q96NR8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RDH12Q96NR8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.01■□□□□ 0.79
RDH12Q96NR8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.01■□□□□ 0.79
RDH12Q96NR8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.01■□□□□ 0.79
RDH12Q96NR8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RDH12Q96NR8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RDH12Q96NR8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RDH12Q96NR8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20■□□□□ 0.79
RDH12Q96NR8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20■□□□□ 0.79
RDH12Q96NR8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
RDH12Q96NR8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20■□□□□ 0.79
RDH12Q96NR8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RDH12Q96NR8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20■□□□□ 0.79
RDH12Q96NR8 DUX4L9-201ENST00000449051 1259 ntBASIC20■□□□□ 0.79
RDH12Q96NR8 AC019171.1-201ENST00000601251 1056 ntBASIC20■□□□□ 0.79
RDH12Q96NR8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RDH12Q96NR8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20■□□□□ 0.79
RDH12Q96NR8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20■□□□□ 0.79
RDH12Q96NR8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RDH12Q96NR8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RDH12Q96NR8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20■□□□□ 0.79
RDH12Q96NR8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RDH12Q96NR8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RDH12Q96NR8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20■□□□□ 0.79
RDH12Q96NR8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RDH12Q96NR8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RDH12Q96NR8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RDH12Q96NR8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RDH12Q96NR8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RDH12Q96NR8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RDH12Q96NR8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RDH12Q96NR8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RDH12Q96NR8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RDH12Q96NR8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.99■□□□□ 0.79
RDH12Q96NR8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms