Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.52■■□□□ 1.52
ATP6V0A1Q93050 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.52■■□□□ 1.52
ATP6V0A1Q93050 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ATP6V0A1Q93050 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.52■■□□□ 1.52
ATP6V0A1Q93050 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.52■■□□□ 1.52
ATP6V0A1Q93050 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.51■■□□□ 1.51
ATP6V0A1Q93050 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V0A1Q93050 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.51■■□□□ 1.51
ATP6V0A1Q93050 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
ATP6V0A1Q93050 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V0A1Q93050 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.51■■□□□ 1.51
ATP6V0A1Q93050 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V0A1Q93050 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
ATP6V0A1Q93050 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ATP6V0A1Q93050 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ATP6V0A1Q93050 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 AC004911.1-201ENST00000416316 871 ntBASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 AC010141.3-201ENST00000456659 717 ntBASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ATP6V0A1Q93050 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
ATP6V0A1Q93050 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
ATP6V0A1Q93050 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V0A1Q93050 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.47■■□□□ 1.51
ATP6V0A1Q93050 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.47■■□□□ 1.51
ATP6V0A1Q93050 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.47■■□□□ 1.51
ATP6V0A1Q93050 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V0A1Q93050 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ATP6V0A1Q93050 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.47■■□□□ 1.51
ATP6V0A1Q93050 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.47■■□□□ 1.51
ATP6V0A1Q93050 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
ATP6V0A1Q93050 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.45■■□□□ 1.51
ATP6V0A1Q93050 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
ATP6V0A1Q93050 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.45■■□□□ 1.51
ATP6V0A1Q93050 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
ATP6V0A1Q93050 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6V0A1Q93050 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6V0A1Q93050 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.45■■□□□ 1.5
ATP6V0A1Q93050 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.45■■□□□ 1.5
ATP6V0A1Q93050 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.45■■□□□ 1.5
ATP6V0A1Q93050 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6V0A1Q93050 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6V0A1Q93050 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
ATP6V0A1Q93050 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A1Q93050 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A1Q93050 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A1Q93050 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.44■■□□□ 1.5
ATP6V0A1Q93050 LINC01960-201ENST00000563759 1884 ntBASIC24.44■■□□□ 1.5
ATP6V0A1Q93050 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A1Q93050 DUSP8P5-201ENST00000422884 1815 ntBASIC24.44■■□□□ 1.5
ATP6V0A1Q93050 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A1Q93050 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V0A1Q93050 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 235.9 ms