Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
SH3RF3Q8TEJ3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SH3RF3Q8TEJ3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.09■■□□□ 1.77
SH3RF3Q8TEJ3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.09■■□□□ 1.77
SH3RF3Q8TEJ3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.09■■□□□ 1.77
SH3RF3Q8TEJ3 AL137784.2-201ENST00000607332 1000 ntBASIC26.09■■□□□ 1.77
SH3RF3Q8TEJ3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.09■■□□□ 1.77
SH3RF3Q8TEJ3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.09■■□□□ 1.77
SH3RF3Q8TEJ3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
SH3RF3Q8TEJ3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SH3RF3Q8TEJ3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SH3RF3Q8TEJ3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.08■■□□□ 1.77
SH3RF3Q8TEJ3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.08■■□□□ 1.77
SH3RF3Q8TEJ3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.08■■□□□ 1.77
SH3RF3Q8TEJ3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
SH3RF3Q8TEJ3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SH3RF3Q8TEJ3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
SH3RF3Q8TEJ3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.06■■□□□ 1.76
SH3RF3Q8TEJ3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.05■■□□□ 1.76
SH3RF3Q8TEJ3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH3RF3Q8TEJ3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH3RF3Q8TEJ3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SH3RF3Q8TEJ3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SH3RF3Q8TEJ3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH3RF3Q8TEJ3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.05■■□□□ 1.76
SH3RF3Q8TEJ3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH3RF3Q8TEJ3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 AC004911.1-201ENST00000416316 871 ntBASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 LINC01960-201ENST00000563759 1884 ntBASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.04■■□□□ 1.76
SH3RF3Q8TEJ3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 RARRES2P11-201ENST00000635158 484 ntBASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.03■■□□□ 1.76
SH3RF3Q8TEJ3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
SH3RF3Q8TEJ3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.02■■□□□ 1.76
SH3RF3Q8TEJ3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.02■■□□□ 1.76
SH3RF3Q8TEJ3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.02■■□□□ 1.76
SH3RF3Q8TEJ3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SH3RF3Q8TEJ3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.02■■□□□ 1.76
SH3RF3Q8TEJ3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
SH3RF3Q8TEJ3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.02■■□□□ 1.76
SH3RF3Q8TEJ3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
SH3RF3Q8TEJ3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SH3RF3Q8TEJ3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SH3RF3Q8TEJ3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.01■■□□□ 1.75
SH3RF3Q8TEJ3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.01■■□□□ 1.75
SH3RF3Q8TEJ3 AC090192.1-201ENST00000517740 490 ntBASIC26.01■■□□□ 1.75
SH3RF3Q8TEJ3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.01■■□□□ 1.75
SH3RF3Q8TEJ3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.01■■□□□ 1.75
SH3RF3Q8TEJ3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.01■■□□□ 1.75
SH3RF3Q8TEJ3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SH3RF3Q8TEJ3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms