Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 KRT87P-202ENST00000534226 1464 ntBASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 AL121832.2-201ENST00000610979 668 ntBASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 AC231657.2-201ENST00000624556 255 ntBASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCSK9Q8NBP7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 AC005224.4-201ENST00000583262 1652 ntBASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 CD99P1-205ENST00000527459 561 ntBASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 AC142086.2-201ENST00000569753 217 ntBASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 AC104187.1-201ENST00000607510 612 ntBASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.34■■□□□ 1.49
PCSK9Q8NBP7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCSK9Q8NBP7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCSK9Q8NBP7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.33■■□□□ 1.49
PCSK9Q8NBP7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.33■■□□□ 1.49
PCSK9Q8NBP7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCSK9Q8NBP7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCSK9Q8NBP7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCSK9Q8NBP7 LINC00543-201ENST00000567234 1845 ntBASIC24.33■■□□□ 1.48
PCSK9Q8NBP7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.33■■□□□ 1.48
PCSK9Q8NBP7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.32■■□□□ 1.48
PCSK9Q8NBP7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PCSK9Q8NBP7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCSK9Q8NBP7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PCSK9Q8NBP7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCSK9Q8NBP7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCSK9Q8NBP7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.31■■□□□ 1.48
PCSK9Q8NBP7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCSK9Q8NBP7 AC083906.2-201ENST00000511578 360 ntBASIC24.31■■□□□ 1.48
PCSK9Q8NBP7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.31■■□□□ 1.48
PCSK9Q8NBP7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCSK9Q8NBP7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PCSK9Q8NBP7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCSK9Q8NBP7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCSK9Q8NBP7 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.3■■□□□ 1.48
PCSK9Q8NBP7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.3■■□□□ 1.48
PCSK9Q8NBP7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.3■■□□□ 1.48
PCSK9Q8NBP7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCSK9Q8NBP7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCSK9Q8NBP7 AC007322.1-201ENST00000426983 750 ntBASIC24.29■■□□□ 1.48
PCSK9Q8NBP7 TSPY6P-201ENST00000448518 926 ntBASIC24.29■■□□□ 1.48
PCSK9Q8NBP7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCSK9Q8NBP7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.29■■□□□ 1.48
PCSK9Q8NBP7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.29■■□□□ 1.48
PCSK9Q8NBP7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCSK9Q8NBP7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCSK9Q8NBP7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.29■■□□□ 1.48
PCSK9Q8NBP7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCSK9Q8NBP7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 DUX4L16-201ENST00000555130 1264 ntBASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 AL050303.2-201ENST00000619798 666 ntBASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCSK9Q8NBP7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
PCSK9Q8NBP7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCSK9Q8NBP7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCSK9Q8NBP7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.27■■□□□ 1.48
PCSK9Q8NBP7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.27■■□□□ 1.48
PCSK9Q8NBP7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.27■■□□□ 1.48
PCSK9Q8NBP7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.27■■□□□ 1.48
PCSK9Q8NBP7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCSK9Q8NBP7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCSK9Q8NBP7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.26■■□□□ 1.47
PCSK9Q8NBP7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCSK9Q8NBP7 AC005181.1-201ENST00000604782 1256 ntBASIC24.26■■□□□ 1.47
PCSK9Q8NBP7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.26■■□□□ 1.47
PCSK9Q8NBP7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCSK9Q8NBP7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCSK9Q8NBP7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.26■■□□□ 1.47
PCSK9Q8NBP7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCSK9Q8NBP7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCSK9Q8NBP7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.25■■□□□ 1.47
PCSK9Q8NBP7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCSK9Q8NBP7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms