Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC28Q86X40 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC28Q86X40 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC28Q86X40 MIR6722-201ENST00000617286 78 ntBASIC19.34■□□□□ 0.69
LRRC28Q86X40 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.34■□□□□ 0.69
LRRC28Q86X40 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC28Q86X40 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC28Q86X40 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRRC28Q86X40 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.34■□□□□ 0.69
LRRC28Q86X40 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC28Q86X40 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LRRC28Q86X40 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.33■□□□□ 0.69
LRRC28Q86X40 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC28Q86X40 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.33■□□□□ 0.69
LRRC28Q86X40 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC28Q86X40 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC28Q86X40 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC28Q86X40 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
LRRC28Q86X40 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC28Q86X40 AC004448.1-201ENST00000458332 883 ntBASIC19.33■□□□□ 0.68
LRRC28Q86X40 MIR6724-1-201ENST00000616420 92 ntBASIC19.33■□□□□ 0.68
LRRC28Q86X40 MIR6724-2-201ENST00000616483 92 ntBASIC19.33■□□□□ 0.68
LRRC28Q86X40 MIR6724-4-201ENST00000617390 92 ntBASIC19.33■□□□□ 0.68
LRRC28Q86X40 MIR6724-3-201ENST00000622482 92 ntBASIC19.33■□□□□ 0.68
LRRC28Q86X40 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRC28Q86X40 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.33■□□□□ 0.68
LRRC28Q86X40 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC28Q86X40 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC28Q86X40 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRC28Q86X40 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRC28Q86X40 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LRRC28Q86X40 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC28Q86X40 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.33■□□□□ 0.68
LRRC28Q86X40 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC28Q86X40 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRRC28Q86X40 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC28Q86X40 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC28Q86X40 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC28Q86X40 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC28Q86X40 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LRRC28Q86X40 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC28Q86X40 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC28Q86X40 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC28Q86X40 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC28Q86X40 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC28Q86X40 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC28Q86X40 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC28Q86X40 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC28Q86X40 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC28Q86X40 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC28Q86X40 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC28Q86X40 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC28Q86X40 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC28Q86X40 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC28Q86X40 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC28Q86X40 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRRC28Q86X40 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC28Q86X40 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC28Q86X40 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LRRC28Q86X40 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC28Q86X40 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC28Q86X40 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC28Q86X40 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC28Q86X40 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC28Q86X40 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC28Q86X40 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRRC28Q86X40 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC28Q86X40 AC073130.3-201ENST00000624389 2278 ntBASIC19.3■□□□□ 0.68
LRRC28Q86X40 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LRRC28Q86X40 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC28Q86X40 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC28Q86X40 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LRRC28Q86X40 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRRC28Q86X40 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC28Q86X40 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC28Q86X40 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC28Q86X40 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
LRRC28Q86X40 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC28Q86X40 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC28Q86X40 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRRC28Q86X40 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC28Q86X40 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRRC28Q86X40 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LRRC28Q86X40 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LRRC28Q86X40 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LRRC28Q86X40 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC28Q86X40 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC28Q86X40 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRRC28Q86X40 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC28Q86X40 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.28■□□□□ 0.68
LRRC28Q86X40 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRRC28Q86X40 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC28Q86X40 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC28Q86X40 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC28Q86X40 FAM99A-202ENST00000538190 1989 ntBASIC19.28■□□□□ 0.68
LRRC28Q86X40 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRC28Q86X40 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC28Q86X40 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC28Q86X40 AL121603.2-201ENST00000557373 2117 ntBASIC19.27■□□□□ 0.68
LRRC28Q86X40 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms