Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Six2Q62232 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Six2Q62232 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.73■□□□□ 0.91
Six2Q62232 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Six2Q62232 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six2Q62232 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Six2Q62232 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Six2Q62232 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six2Q62232 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Six2Q62232 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six2Q62232 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six2Q62232 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Six2Q62232 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Six2Q62232 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six2Q62232 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Six2Q62232 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six2Q62232 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Six2Q62232 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six2Q62232 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six2Q62232 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six2Q62232 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.71■□□□□ 0.91
Six2Q62232 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Six2Q62232 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Six2Q62232 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six2Q62232 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Six2Q62232 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Six2Q62232 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six2Q62232 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six2Q62232 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Six2Q62232 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Six2Q62232 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Six2Q62232 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six2Q62232 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six2Q62232 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six2Q62232 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Six2Q62232 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.69■□□□□ 0.9
Six2Q62232 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six2Q62232 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.69■□□□□ 0.9
Six2Q62232 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.69■□□□□ 0.9
Six2Q62232 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.69■□□□□ 0.9
Six2Q62232 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six2Q62232 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six2Q62232 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Six2Q62232 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.68■□□□□ 0.9
Six2Q62232 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six2Q62232 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six2Q62232 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six2Q62232 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.68■□□□□ 0.9
Six2Q62232 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Six2Q62232 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six2Q62232 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.68■□□□□ 0.9
Six2Q62232 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Six2Q62232 Smad6-203ENSMUST00000179458 273 ntBASIC20.68■□□□□ 0.9
Six2Q62232 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six2Q62232 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six2Q62232 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.68■□□□□ 0.9
Six2Q62232 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six2Q62232 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six2Q62232 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Six2Q62232 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Six2Q62232 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Six2Q62232 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Six2Q62232 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six2Q62232 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Six2Q62232 Gm12821-201ENSMUST00000120022 600 ntBASIC20.66■□□□□ 0.9
Six2Q62232 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six2Q62232 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six2Q62232 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Six2Q62232 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six2Q62232 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six2Q62232 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Six2Q62232 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Six2Q62232 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six2Q62232 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Six2Q62232 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six2Q62232 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Six2Q62232 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.65■□□□□ 0.9
Six2Q62232 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.65■□□□□ 0.9
Six2Q62232 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six2Q62232 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.65■□□□□ 0.9
Six2Q62232 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Six2Q62232 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Six2Q62232 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Six2Q62232 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Six2Q62232 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.64■□□□□ 0.89
Six2Q62232 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six2Q62232 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six2Q62232 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Six2Q62232 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Six2Q62232 Gm8493-201ENSMUST00000196881 489 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms