Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TBC1D28Q2M2D7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 AL136967.2-201ENST00000623968 743 ntBASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.96■□□□□ 0.63
TBC1D28Q2M2D7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 AC010141.3-201ENST00000456659 717 ntBASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 SUDS3P1-201ENST00000505831 966 ntBASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TBC1D28Q2M2D7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 CA15P2-201ENST00000611168 834 ntBASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TBC1D28Q2M2D7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.93■□□□□ 0.62
TBC1D28Q2M2D7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 AC087742.1-201ENST00000575880 1738 ntBASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 IGHV3-19-201ENST00000521488 291 ntBASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.92■□□□□ 0.62
TBC1D28Q2M2D7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 AC012676.1-201ENST00000574705 1949 ntBASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D28Q2M2D7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 TSPY26P-201ENST00000476365 1326 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms