Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ZC3H6P61129 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ZC3H6P61129 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
ZC3H6P61129 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ZC3H6P61129 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC29.52■■■□□ 2.32
ZC3H6P61129 METTL15-202ENST00000403099 795 ntTSL 5 BASIC29.52■■■□□ 2.32
ZC3H6P61129 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC29.52■■■□□ 2.32
ZC3H6P61129 MIR4651-201ENST00000582622 73 ntBASIC29.52■■■□□ 2.32
ZC3H6P61129 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ZC3H6P61129 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC29.52■■■□□ 2.32
ZC3H6P61129 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.32
ZC3H6P61129 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
ZC3H6P61129 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC29.51■■■□□ 2.31
ZC3H6P61129 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC29.51■■■□□ 2.31
ZC3H6P61129 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
ZC3H6P61129 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC29.51■■■□□ 2.31
ZC3H6P61129 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC29.51■■■□□ 2.31
ZC3H6P61129 TFG-210ENST00000620299 1289 ntTSL 5 BASIC29.51■■■□□ 2.31
ZC3H6P61129 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC29.51■■■□□ 2.31
ZC3H6P61129 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.51■■■□□ 2.31
ZC3H6P61129 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
ZC3H6P61129 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.51■■■□□ 2.31
ZC3H6P61129 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
ZC3H6P61129 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
ZC3H6P61129 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ZC3H6P61129 AL353803.4-201ENST00000565882 1934 ntBASIC29.5■■■□□ 2.31
ZC3H6P61129 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC29.5■■■□□ 2.31
ZC3H6P61129 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC29.5■■■□□ 2.31
ZC3H6P61129 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC29.5■■■□□ 2.31
ZC3H6P61129 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.5■■■□□ 2.31
ZC3H6P61129 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
ZC3H6P61129 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ZC3H6P61129 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ZC3H6P61129 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ZC3H6P61129 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ZC3H6P61129 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC29.49■■■□□ 2.31
ZC3H6P61129 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ZC3H6P61129 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ZC3H6P61129 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
ZC3H6P61129 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ZC3H6P61129 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC29.49■■■□□ 2.31
ZC3H6P61129 UBE2DNL-204ENST00000602536 740 ntBASIC29.49■■■□□ 2.31
ZC3H6P61129 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC29.49■■■□□ 2.31
ZC3H6P61129 AC005181.1-201ENST00000604782 1256 ntBASIC29.49■■■□□ 2.31
ZC3H6P61129 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC29.49■■■□□ 2.31
ZC3H6P61129 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZC3H6P61129 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZC3H6P61129 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZC3H6P61129 AC007322.1-201ENST00000426983 750 ntBASIC29.48■■■□□ 2.31
ZC3H6P61129 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC29.48■■■□□ 2.31
ZC3H6P61129 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC29.48■■■□□ 2.31
ZC3H6P61129 AC231657.2-201ENST00000624556 255 ntBASIC29.48■■■□□ 2.31
ZC3H6P61129 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZC3H6P61129 AC142381.3-201ENST00000568208 1670 ntBASIC29.47■■■□□ 2.31
ZC3H6P61129 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
ZC3H6P61129 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ZC3H6P61129 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
ZC3H6P61129 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ZC3H6P61129 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ZC3H6P61129 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC29.47■■■□□ 2.31
ZC3H6P61129 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC29.47■■■□□ 2.31
ZC3H6P61129 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC29.47■■■□□ 2.31
ZC3H6P61129 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ZC3H6P61129 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
ZC3H6P61129 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
ZC3H6P61129 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
ZC3H6P61129 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ZC3H6P61129 USP45-205ENST00000472914 1617 ntTSL 5 BASIC29.46■■■□□ 2.31
ZC3H6P61129 PARP1-202ENST00000366792 553 ntTSL 3 BASIC29.46■■■□□ 2.31
ZC3H6P61129 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ZC3H6P61129 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ZC3H6P61129 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
ZC3H6P61129 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC29.46■■■□□ 2.31
ZC3H6P61129 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ZC3H6P61129 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ZC3H6P61129 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ZC3H6P61129 AC005224.4-201ENST00000583262 1652 ntBASIC29.46■■■□□ 2.31
ZC3H6P61129 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC29.45■■■□□ 2.31
ZC3H6P61129 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
ZC3H6P61129 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
ZC3H6P61129 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ZC3H6P61129 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC29.45■■■□□ 2.31
ZC3H6P61129 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
ZC3H6P61129 OAS3-207ENST00000551007 998 ntTSL 2 BASIC29.45■■■□□ 2.31
ZC3H6P61129 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
ZC3H6P61129 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
ZC3H6P61129 PARP1-210ENST00000629232 477 ntTSL 5 BASIC29.45■■■□□ 2.31
ZC3H6P61129 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
ZC3H6P61129 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ZC3H6P61129 KRT87P-202ENST00000534226 1464 ntBASIC29.44■■■□□ 2.3
ZC3H6P61129 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ZC3H6P61129 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
ZC3H6P61129 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC29.44■■■□□ 2.3
ZC3H6P61129 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC29.44■■■□□ 2.3
ZC3H6P61129 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ZC3H6P61129 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ZC3H6P61129 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
ZC3H6P61129 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ZC3H6P61129 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
ZC3H6P61129 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms