Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trove2O08848 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trove2O08848 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trove2O08848 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trove2O08848 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trove2O08848 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Trove2O08848 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trove2O08848 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trove2O08848 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trove2O08848 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trove2O08848 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trove2O08848 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trove2O08848 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trove2O08848 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trove2O08848 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trove2O08848 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trove2O08848 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trove2O08848 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.75■□□□□ 0.75
Trove2O08848 Gm9959-201ENSMUST00000068277 390 ntBASIC19.75■□□□□ 0.75
Trove2O08848 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trove2O08848 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trove2O08848 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trove2O08848 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trove2O08848 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trove2O08848 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.74■□□□□ 0.75
Trove2O08848 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trove2O08848 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trove2O08848 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trove2O08848 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.74■□□□□ 0.75
Trove2O08848 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trove2O08848 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trove2O08848 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trove2O08848 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trove2O08848 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trove2O08848 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Gm7143-201ENSMUST00000222811 859 ntBASIC19.73■□□□□ 0.75
Trove2O08848 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trove2O08848 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trove2O08848 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trove2O08848 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Trove2O08848 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trove2O08848 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.72■□□□□ 0.75
Trove2O08848 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Trove2O08848 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trove2O08848 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trove2O08848 Rps24-207ENSMUST00000224568 714 ntBASIC19.71■□□□□ 0.75
Trove2O08848 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trove2O08848 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trove2O08848 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trove2O08848 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trove2O08848 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trove2O08848 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trove2O08848 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trove2O08848 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trove2O08848 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.71■□□□□ 0.74
Trove2O08848 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trove2O08848 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trove2O08848 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trove2O08848 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trove2O08848 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trove2O08848 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trove2O08848 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trove2O08848 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Trove2O08848 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trove2O08848 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trove2O08848 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trove2O08848 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trove2O08848 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trove2O08848 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.69■□□□□ 0.74
Trove2O08848 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trove2O08848 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trove2O08848 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.69■□□□□ 0.74
Trove2O08848 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.69■□□□□ 0.74
Trove2O08848 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.69■□□□□ 0.74
Trove2O08848 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trove2O08848 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trove2O08848 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trove2O08848 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trove2O08848 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms