Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC104187.1-201ENST00000607510 612 ntBASIC28.16■■■□□ 2.1
LOC102724428A0A0B4J2F2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC28.16■■■□□ 2.1
LOC102724428A0A0B4J2F2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.16■■■□□ 2.1
LOC102724428A0A0B4J2F2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
LOC102724428A0A0B4J2F2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC28.16■■■□□ 2.1
LOC102724428A0A0B4J2F2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LOC102724428A0A0B4J2F2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LOC102724428A0A0B4J2F2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
LOC102724428A0A0B4J2F2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
LOC102724428A0A0B4J2F2 DUX4L16-201ENST00000555130 1264 ntBASIC28.15■■■□□ 2.1
LOC102724428A0A0B4J2F2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC28.15■■■□□ 2.1
LOC102724428A0A0B4J2F2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC28.15■■■□□ 2.1
LOC102724428A0A0B4J2F2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
LOC102724428A0A0B4J2F2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
LOC102724428A0A0B4J2F2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
LOC102724428A0A0B4J2F2 SLC7A5P2-201ENST00000553010 536 ntBASIC28.14■■■□□ 2.1
LOC102724428A0A0B4J2F2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
LOC102724428A0A0B4J2F2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
LOC102724428A0A0B4J2F2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
LOC102724428A0A0B4J2F2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
LOC102724428A0A0B4J2F2 AC005224.4-201ENST00000583262 1652 ntBASIC28.13■■■□□ 2.09
LOC102724428A0A0B4J2F2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
LOC102724428A0A0B4J2F2 AC231657.2-201ENST00000624556 255 ntBASIC28.13■■■□□ 2.09
LOC102724428A0A0B4J2F2 AC066615.1-201ENST00000640911 628 ntBASIC28.13■■■□□ 2.09
LOC102724428A0A0B4J2F2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
LOC102724428A0A0B4J2F2 KRT87P-202ENST00000534226 1464 ntBASIC28.13■■■□□ 2.09
LOC102724428A0A0B4J2F2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.12■■■□□ 2.09
LOC102724428A0A0B4J2F2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.12■■■□□ 2.09
LOC102724428A0A0B4J2F2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
LOC102724428A0A0B4J2F2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
LOC102724428A0A0B4J2F2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC28.12■■■□□ 2.09
LOC102724428A0A0B4J2F2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC28.12■■■□□ 2.09
LOC102724428A0A0B4J2F2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
LOC102724428A0A0B4J2F2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
LOC102724428A0A0B4J2F2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 KRT18P6-201ENST00000555540 1265 ntBASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.11■■■□□ 2.09
LOC102724428A0A0B4J2F2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
LOC102724428A0A0B4J2F2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 AL138781.1-201ENST00000566567 1274 ntBASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 UBE2DNL-204ENST00000602536 740 ntBASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 AC005181.1-201ENST00000604782 1256 ntBASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.09■■■□□ 2.09
LOC102724428A0A0B4J2F2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 AC007322.1-201ENST00000426983 750 ntBASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
LOC102724428A0A0B4J2F2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.08■■■□□ 2.08
LOC102724428A0A0B4J2F2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
LOC102724428A0A0B4J2F2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
LOC102724428A0A0B4J2F2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
LOC102724428A0A0B4J2F2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.07■■■□□ 2.08
LOC102724428A0A0B4J2F2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC28.07■■■□□ 2.08
LOC102724428A0A0B4J2F2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
LOC102724428A0A0B4J2F2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
LOC102724428A0A0B4J2F2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.07■■■□□ 2.08
LOC102724428A0A0B4J2F2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
LOC102724428A0A0B4J2F2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
LOC102724428A0A0B4J2F2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
LOC102724428A0A0B4J2F2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
LOC102724428A0A0B4J2F2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LOC102724428A0A0B4J2F2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.06■■■□□ 2.08
LOC102724428A0A0B4J2F2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
LOC102724428A0A0B4J2F2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.06■■■□□ 2.08
LOC102724428A0A0B4J2F2 AC009237.3-201ENST00000393279 1427 ntBASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms