Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.85■■■□□ 2.69
SLC52A1Q9NWF4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.85■■■□□ 2.69
SLC52A1Q9NWF4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SLC52A1Q9NWF4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.84■■■□□ 2.69
SLC52A1Q9NWF4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC31.84■■■□□ 2.69
SLC52A1Q9NWF4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC31.84■■■□□ 2.69
SLC52A1Q9NWF4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC31.84■■■□□ 2.69
SLC52A1Q9NWF4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SLC52A1Q9NWF4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SLC52A1Q9NWF4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC31.83■■■□□ 2.69
SLC52A1Q9NWF4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SLC52A1Q9NWF4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SLC52A1Q9NWF4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
SLC52A1Q9NWF4 AC142086.2-201ENST00000569753 217 ntBASIC31.83■■■□□ 2.69
SLC52A1Q9NWF4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SLC52A1Q9NWF4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC31.82■■■□□ 2.69
SLC52A1Q9NWF4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
SLC52A1Q9NWF4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SLC52A1Q9NWF4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC31.82■■■□□ 2.68
SLC52A1Q9NWF4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.82■■■□□ 2.68
SLC52A1Q9NWF4 MFSD11-216ENST00000590393 1141 ntBASIC31.82■■■□□ 2.68
SLC52A1Q9NWF4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
SLC52A1Q9NWF4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
SLC52A1Q9NWF4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC31.82■■■□□ 2.68
SLC52A1Q9NWF4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
SLC52A1Q9NWF4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SLC52A1Q9NWF4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC31.81■■■□□ 2.68
SLC52A1Q9NWF4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SLC52A1Q9NWF4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
SLC52A1Q9NWF4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31.8■■■□□ 2.68
SLC52A1Q9NWF4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SLC52A1Q9NWF4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.8■■■□□ 2.68
SLC52A1Q9NWF4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SLC52A1Q9NWF4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.8■■■□□ 2.68
SLC52A1Q9NWF4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SLC52A1Q9NWF4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SLC52A1Q9NWF4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
SLC52A1Q9NWF4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC31.79■■■□□ 2.68
SLC52A1Q9NWF4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC31.79■■■□□ 2.68
SLC52A1Q9NWF4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
SLC52A1Q9NWF4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC31.78■■■□□ 2.68
SLC52A1Q9NWF4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC31.78■■■□□ 2.68
SLC52A1Q9NWF4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC31.78■■■□□ 2.68
SLC52A1Q9NWF4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC31.78■■■□□ 2.68
SLC52A1Q9NWF4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC31.78■■■□□ 2.68
SLC52A1Q9NWF4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
SLC52A1Q9NWF4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SLC52A1Q9NWF4 AL353803.4-201ENST00000565882 1934 ntBASIC31.77■■■□□ 2.68
SLC52A1Q9NWF4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
SLC52A1Q9NWF4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
SLC52A1Q9NWF4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SLC52A1Q9NWF4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SLC52A1Q9NWF4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.77■■■□□ 2.68
SLC52A1Q9NWF4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SLC52A1Q9NWF4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SLC52A1Q9NWF4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SLC52A1Q9NWF4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
SLC52A1Q9NWF4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
SLC52A1Q9NWF4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SLC52A1Q9NWF4 TMEM191A-211ENST00000637163 1067 ntBASIC31.76■■■□□ 2.67
SLC52A1Q9NWF4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SLC52A1Q9NWF4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
SLC52A1Q9NWF4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SLC52A1Q9NWF4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC31.75■■■□□ 2.67
SLC52A1Q9NWF4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
SLC52A1Q9NWF4 AL050303.2-201ENST00000619798 666 ntBASIC31.75■■■□□ 2.67
SLC52A1Q9NWF4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
SLC52A1Q9NWF4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.75■■■□□ 2.67
SLC52A1Q9NWF4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC31.75■■■□□ 2.67
SLC52A1Q9NWF4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC31.74■■■□□ 2.67
SLC52A1Q9NWF4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.74■■■□□ 2.67
SLC52A1Q9NWF4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SLC52A1Q9NWF4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
SLC52A1Q9NWF4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
SLC52A1Q9NWF4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
SLC52A1Q9NWF4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC31.73■■■□□ 2.67
SLC52A1Q9NWF4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC31.73■■■□□ 2.67
SLC52A1Q9NWF4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
SLC52A1Q9NWF4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 AL121832.2-201ENST00000610979 668 ntBASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 AC005224.4-201ENST00000583262 1652 ntBASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 KRT87P-202ENST00000534226 1464 ntBASIC31.72■■■□□ 2.67
SLC52A1Q9NWF4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SLC52A1Q9NWF4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SLC52A1Q9NWF4 CD99P1-205ENST00000527459 561 ntBASIC31.71■■■□□ 2.67
SLC52A1Q9NWF4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC31.71■■■□□ 2.67
SLC52A1Q9NWF4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.71■■■□□ 2.67
SLC52A1Q9NWF4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.71■■■□□ 2.67
SLC52A1Q9NWF4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SLC52A1Q9NWF4 AC231657.2-201ENST00000624556 255 ntBASIC31.71■■■□□ 2.67
SLC52A1Q9NWF4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SLC52A1Q9NWF4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
SLC52A1Q9NWF4 TSPY6P-201ENST00000448518 926 ntBASIC31.7■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms