Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
VPS16Q9H269 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.03■■□□□ 1.44
VPS16Q9H269 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
VPS16Q9H269 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.03■■□□□ 1.44
VPS16Q9H269 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
VPS16Q9H269 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
VPS16Q9H269 TSPY9P-201ENST00000440215 945 ntBASIC24.03■■□□□ 1.44
VPS16Q9H269 TSPY11P-201ENST00000442607 1045 ntBASIC24.03■■□□□ 1.44
VPS16Q9H269 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.03■■□□□ 1.44
VPS16Q9H269 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.03■■□□□ 1.44
VPS16Q9H269 AC010997.5-201ENST00000609182 354 ntBASIC24.03■■□□□ 1.44
VPS16Q9H269 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.03■■□□□ 1.44
VPS16Q9H269 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS16Q9H269 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.03■■□□□ 1.44
VPS16Q9H269 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS16Q9H269 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.02■■□□□ 1.44
VPS16Q9H269 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS16Q9H269 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
VPS16Q9H269 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.02■■□□□ 1.44
VPS16Q9H269 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
VPS16Q9H269 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
VPS16Q9H269 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.02■■□□□ 1.44
VPS16Q9H269 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS16Q9H269 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS16Q9H269 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.02■■□□□ 1.44
VPS16Q9H269 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
VPS16Q9H269 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
VPS16Q9H269 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.01■■□□□ 1.43
VPS16Q9H269 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VPS16Q9H269 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VPS16Q9H269 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
VPS16Q9H269 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
VPS16Q9H269 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.01■■□□□ 1.43
VPS16Q9H269 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
VPS16Q9H269 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
VPS16Q9H269 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS16Q9H269 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24■■□□□ 1.43
VPS16Q9H269 C17orf82-201ENST00000623772 1530 ntBASIC24■■□□□ 1.43
VPS16Q9H269 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24■■□□□ 1.43
VPS16Q9H269 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS16Q9H269 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24■■□□□ 1.43
VPS16Q9H269 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24■■□□□ 1.43
VPS16Q9H269 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS16Q9H269 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24■■□□□ 1.43
VPS16Q9H269 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VPS16Q9H269 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
VPS16Q9H269 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
VPS16Q9H269 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VPS16Q9H269 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
VPS16Q9H269 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
VPS16Q9H269 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.99■■□□□ 1.43
VPS16Q9H269 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
VPS16Q9H269 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
VPS16Q9H269 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.98■■□□□ 1.43
VPS16Q9H269 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.98■■□□□ 1.43
VPS16Q9H269 AC009299.2-201ENST00000482477 511 ntBASIC23.98■■□□□ 1.43
VPS16Q9H269 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
VPS16Q9H269 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.98■■□□□ 1.43
VPS16Q9H269 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
VPS16Q9H269 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS16Q9H269 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS16Q9H269 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS16Q9H269 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS16Q9H269 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS16Q9H269 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS16Q9H269 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.97■■□□□ 1.43
VPS16Q9H269 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.97■■□□□ 1.43
VPS16Q9H269 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.97■■□□□ 1.43
VPS16Q9H269 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.97■■□□□ 1.43
VPS16Q9H269 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS16Q9H269 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.97■■□□□ 1.43
VPS16Q9H269 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
VPS16Q9H269 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.96■■□□□ 1.43
VPS16Q9H269 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
VPS16Q9H269 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.96■■□□□ 1.43
VPS16Q9H269 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS16Q9H269 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.96■■□□□ 1.43
VPS16Q9H269 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms