Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim13Q9CYB0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim13Q9CYB0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim13Q9CYB0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim13Q9CYB0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Gm7143-201ENSMUST00000222811 859 ntBASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trim13Q9CYB0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim13Q9CYB0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim13Q9CYB0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim13Q9CYB0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim13Q9CYB0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim13Q9CYB0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim13Q9CYB0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim13Q9CYB0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim13Q9CYB0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim13Q9CYB0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim13Q9CYB0 Gm13238-201ENSMUST00000117655 780 ntBASIC17.92■□□□□ 0.46
Trim13Q9CYB0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.92■□□□□ 0.46
Trim13Q9CYB0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim13Q9CYB0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim13Q9CYB0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim13Q9CYB0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim13Q9CYB0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim13Q9CYB0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim13Q9CYB0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim13Q9CYB0 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.91■□□□□ 0.46
Trim13Q9CYB0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim13Q9CYB0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim13Q9CYB0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim13Q9CYB0 Gm43566-201ENSMUST00000196851 808 ntBASIC17.91■□□□□ 0.46
Trim13Q9CYB0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim13Q9CYB0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim13Q9CYB0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Trim13Q9CYB0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim13Q9CYB0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim13Q9CYB0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.89■□□□□ 0.45
Trim13Q9CYB0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim13Q9CYB0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim13Q9CYB0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trim13Q9CYB0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim13Q9CYB0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim13Q9CYB0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim13Q9CYB0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim13Q9CYB0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim13Q9CYB0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim13Q9CYB0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim13Q9CYB0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim13Q9CYB0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim13Q9CYB0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim13Q9CYB0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim13Q9CYB0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.87■□□□□ 0.45
Trim13Q9CYB0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim13Q9CYB0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim13Q9CYB0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms