Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ssu72Q9CY97 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.38■□□□□ 0.69
Ssu72Q9CY97 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssu72Q9CY97 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ssu72Q9CY97 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssu72Q9CY97 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssu72Q9CY97 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssu72Q9CY97 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.37■□□□□ 0.69
Ssu72Q9CY97 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssu72Q9CY97 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ssu72Q9CY97 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssu72Q9CY97 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ssu72Q9CY97 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssu72Q9CY97 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssu72Q9CY97 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssu72Q9CY97 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.36■□□□□ 0.69
Ssu72Q9CY97 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssu72Q9CY97 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ssu72Q9CY97 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.36■□□□□ 0.69
Ssu72Q9CY97 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ssu72Q9CY97 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ssu72Q9CY97 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ssu72Q9CY97 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ssu72Q9CY97 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ssu72Q9CY97 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ssu72Q9CY97 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ssu72Q9CY97 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ssu72Q9CY97 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ssu72Q9CY97 Etf1-202ENSMUST00000180351 108 ntBASIC19.33■□□□□ 0.68
Ssu72Q9CY97 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ssu72Q9CY97 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ssu72Q9CY97 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ssu72Q9CY97 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ssu72Q9CY97 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.31■□□□□ 0.68
Ssu72Q9CY97 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.31■□□□□ 0.68
Ssu72Q9CY97 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.3■□□□□ 0.68
Ssu72Q9CY97 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssu72Q9CY97 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.29■□□□□ 0.68
Ssu72Q9CY97 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms