Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.83■□□□□ 0.44
ZNF48Q96MX3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF48Q96MX3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF48Q96MX3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.83■□□□□ 0.44
ZNF48Q96MX3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.83■□□□□ 0.44
ZNF48Q96MX3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF48Q96MX3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF48Q96MX3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF48Q96MX3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF48Q96MX3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.82■□□□□ 0.44
ZNF48Q96MX3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 AC012676.1-201ENST00000574705 1949 ntBASIC17.82■□□□□ 0.44
ZNF48Q96MX3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 LINC02228-203ENST00000641970 1355 ntBASIC17.82■□□□□ 0.44
ZNF48Q96MX3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 AC004911.1-201ENST00000416316 871 ntBASIC17.82■□□□□ 0.44
ZNF48Q96MX3 NTF6G-201ENST00000591094 616 ntBASIC17.82■□□□□ 0.44
ZNF48Q96MX3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 AC105233.4-201ENST00000642045 216 ntBASIC17.82■□□□□ 0.44
ZNF48Q96MX3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF48Q96MX3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF48Q96MX3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.8■□□□□ 0.44
ZNF48Q96MX3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF48Q96MX3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 AC079630.1-202ENST00000618127 1840 ntBASIC17.79■□□□□ 0.44
ZNF48Q96MX3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF48Q96MX3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF48Q96MX3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms