Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Col23a1Q8K4G2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Col23a1Q8K4G2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col23a1Q8K4G2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col23a1Q8K4G2 Gm9484-201ENSMUST00000195892 1159 ntBASIC24.01■■□□□ 1.43
Col23a1Q8K4G2 AC154649.1-201ENSMUST00000227392 384 ntBASIC24.01■■□□□ 1.43
Col23a1Q8K4G2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col23a1Q8K4G2 Gm13509-201ENSMUST00000119733 1308 ntBASIC24.01■■□□□ 1.43
Col23a1Q8K4G2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Col23a1Q8K4G2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC24■■□□□ 1.43
Col23a1Q8K4G2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC24■■□□□ 1.43
Col23a1Q8K4G2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col23a1Q8K4G2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24■■□□□ 1.43
Col23a1Q8K4G2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Col23a1Q8K4G2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col23a1Q8K4G2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24■■□□□ 1.43
Col23a1Q8K4G2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col23a1Q8K4G2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col23a1Q8K4G2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col23a1Q8K4G2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col23a1Q8K4G2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Col23a1Q8K4G2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC23.99■■□□□ 1.43
Col23a1Q8K4G2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col23a1Q8K4G2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col23a1Q8K4G2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Col23a1Q8K4G2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Col23a1Q8K4G2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.98■■□□□ 1.43
Col23a1Q8K4G2 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.98■■□□□ 1.43
Col23a1Q8K4G2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.98■■□□□ 1.43
Col23a1Q8K4G2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col23a1Q8K4G2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col23a1Q8K4G2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Col23a1Q8K4G2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Col23a1Q8K4G2 Gm37055-201ENSMUST00000191866 133 ntBASIC23.97■■□□□ 1.43
Col23a1Q8K4G2 Gm2559-201ENSMUST00000201323 363 ntBASIC23.97■■□□□ 1.43
Col23a1Q8K4G2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Col23a1Q8K4G2 Dio3-201ENSMUST00000097228 1449 ntBASIC23.97■■□□□ 1.43
Col23a1Q8K4G2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col23a1Q8K4G2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Gm10698-201ENSMUST00000182663 604 ntBASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col23a1Q8K4G2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Col23a1Q8K4G2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Col23a1Q8K4G2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
Col23a1Q8K4G2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC23.95■■□□□ 1.42
Col23a1Q8K4G2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC23.95■■□□□ 1.42
Col23a1Q8K4G2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.95■■□□□ 1.42
Col23a1Q8K4G2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Col23a1Q8K4G2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col23a1Q8K4G2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Col23a1Q8K4G2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Col23a1Q8K4G2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Col23a1Q8K4G2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Col23a1Q8K4G2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Col23a1Q8K4G2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col23a1Q8K4G2 Gm9987-201ENSMUST00000069768 567 ntBASIC23.94■■□□□ 1.42
Col23a1Q8K4G2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col23a1Q8K4G2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col23a1Q8K4G2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col23a1Q8K4G2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Col23a1Q8K4G2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Col23a1Q8K4G2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.93■■□□□ 1.42
Col23a1Q8K4G2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.93■■□□□ 1.42
Col23a1Q8K4G2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Col23a1Q8K4G2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col23a1Q8K4G2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Col23a1Q8K4G2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col23a1Q8K4G2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 AC121577.1-201ENSMUST00000227302 707 ntBASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col23a1Q8K4G2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Col23a1Q8K4G2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms