Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrpl47Q8K2Y7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mrpl47Q8K2Y7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.26■□□□□ 0.67
Mrpl47Q8K2Y7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl47Q8K2Y7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl47Q8K2Y7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Mrpl47Q8K2Y7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl47Q8K2Y7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Mrpl47Q8K2Y7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mrpl47Q8K2Y7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Mrpl47Q8K2Y7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 AA386476-201ENSMUST00000098781 1665 ntBASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl47Q8K2Y7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.24■□□□□ 0.67
Mrpl47Q8K2Y7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl47Q8K2Y7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.24■□□□□ 0.67
Mrpl47Q8K2Y7 Gm5812-201ENSMUST00000061073 957 ntBASIC19.24■□□□□ 0.67
Mrpl47Q8K2Y7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl47Q8K2Y7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl47Q8K2Y7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.24■□□□□ 0.67
Mrpl47Q8K2Y7 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.24■□□□□ 0.67
Mrpl47Q8K2Y7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl47Q8K2Y7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Mrpl47Q8K2Y7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
Mrpl47Q8K2Y7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.23■□□□□ 0.67
Mrpl47Q8K2Y7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.23■□□□□ 0.67
Mrpl47Q8K2Y7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl47Q8K2Y7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl47Q8K2Y7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Mrpl47Q8K2Y7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl47Q8K2Y7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl47Q8K2Y7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Mrpl47Q8K2Y7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Mrpl47Q8K2Y7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl47Q8K2Y7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl47Q8K2Y7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl47Q8K2Y7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl47Q8K2Y7 Gm15546-201ENSMUST00000122095 826 ntBASIC19.22■□□□□ 0.67
Mrpl47Q8K2Y7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl47Q8K2Y7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl47Q8K2Y7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl47Q8K2Y7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Mrpl47Q8K2Y7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl47Q8K2Y7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl47Q8K2Y7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl47Q8K2Y7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl47Q8K2Y7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl47Q8K2Y7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl47Q8K2Y7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl47Q8K2Y7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl47Q8K2Y7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms