Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SLX4Q8IY92 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SLX4Q8IY92 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC27.14■■□□□ 1.94
SLX4Q8IY92 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SLX4Q8IY92 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
SLX4Q8IY92 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SLX4Q8IY92 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.13■■□□□ 1.93
SLX4Q8IY92 AC079140.4-201ENST00000507448 529 ntBASIC27.13■■□□□ 1.93
SLX4Q8IY92 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLX4Q8IY92 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.13■■□□□ 1.93
SLX4Q8IY92 AL121832.2-201ENST00000610979 668 ntBASIC27.13■■□□□ 1.93
SLX4Q8IY92 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLX4Q8IY92 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.13■■□□□ 1.93
SLX4Q8IY92 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SLX4Q8IY92 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLX4Q8IY92 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SLX4Q8IY92 TSPY6P-201ENST00000448518 926 ntBASIC27.13■■□□□ 1.93
SLX4Q8IY92 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC27.13■■□□□ 1.93
SLX4Q8IY92 KLF13-207ENST00000560473 489 ntTSL 3 BASIC27.13■■□□□ 1.93
SLX4Q8IY92 AC098934.4-201ENST00000564127 592 ntBASIC27.13■■□□□ 1.93
SLX4Q8IY92 AL138781.1-201ENST00000566567 1274 ntBASIC27.13■■□□□ 1.93
SLX4Q8IY92 UBE2DNL-204ENST00000602536 740 ntBASIC27.13■■□□□ 1.93
SLX4Q8IY92 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.12■■□□□ 1.93
SLX4Q8IY92 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.12■■□□□ 1.93
SLX4Q8IY92 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLX4Q8IY92 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.12■■□□□ 1.93
SLX4Q8IY92 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
SLX4Q8IY92 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.12■■□□□ 1.93
SLX4Q8IY92 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLX4Q8IY92 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SLX4Q8IY92 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SLX4Q8IY92 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SLX4Q8IY92 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLX4Q8IY92 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SLX4Q8IY92 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SLX4Q8IY92 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLX4Q8IY92 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC27.11■■□□□ 1.93
SLX4Q8IY92 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC27.11■■□□□ 1.93
SLX4Q8IY92 TFG-210ENST00000620299 1289 ntTSL 5 BASIC27.11■■□□□ 1.93
SLX4Q8IY92 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SLX4Q8IY92 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.1■■□□□ 1.93
SLX4Q8IY92 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.1■■□□□ 1.93
SLX4Q8IY92 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC27.1■■□□□ 1.93
SLX4Q8IY92 AC010141.3-201ENST00000456659 717 ntBASIC27.1■■□□□ 1.93
SLX4Q8IY92 OAS3-207ENST00000551007 998 ntTSL 2 BASIC27.1■■□□□ 1.93
SLX4Q8IY92 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC27.1■■□□□ 1.93
SLX4Q8IY92 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC27.1■■□□□ 1.93
SLX4Q8IY92 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SLX4Q8IY92 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.1■■□□□ 1.93
SLX4Q8IY92 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SLX4Q8IY92 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.09■■□□□ 1.93
SLX4Q8IY92 AC069152.1-201ENST00000438030 544 ntBASIC27.09■■□□□ 1.93
SLX4Q8IY92 MDK-213ENST00000617138 635 ntTSL 2 BASIC27.09■■□□□ 1.93
SLX4Q8IY92 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLX4Q8IY92 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.09■■□□□ 1.93
SLX4Q8IY92 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLX4Q8IY92 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SLX4Q8IY92 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.09■■□□□ 1.93
SLX4Q8IY92 AC231657.2-201ENST00000624556 255 ntBASIC27.09■■□□□ 1.93
SLX4Q8IY92 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLX4Q8IY92 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLX4Q8IY92 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.08■■□□□ 1.93
SLX4Q8IY92 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLX4Q8IY92 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLX4Q8IY92 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLX4Q8IY92 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLX4Q8IY92 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
SLX4Q8IY92 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.92
SLX4Q8IY92 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SLX4Q8IY92 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.07■■□□□ 1.92
SLX4Q8IY92 KRT87P-202ENST00000534226 1464 ntBASIC27.07■■□□□ 1.92
SLX4Q8IY92 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SLX4Q8IY92 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SLX4Q8IY92 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.07■■□□□ 1.92
SLX4Q8IY92 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SLX4Q8IY92 AC083906.2-201ENST00000511578 360 ntBASIC27.06■■□□□ 1.92
SLX4Q8IY92 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.06■■□□□ 1.92
SLX4Q8IY92 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.06■■□□□ 1.92
SLX4Q8IY92 AC005224.4-201ENST00000583262 1652 ntBASIC27.06■■□□□ 1.92
SLX4Q8IY92 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SLX4Q8IY92 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SLX4Q8IY92 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.06■■□□□ 1.92
SLX4Q8IY92 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SLX4Q8IY92 CNN2P6-201ENST00000439038 900 ntBASIC27.06■■□□□ 1.92
SLX4Q8IY92 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC27.06■■□□□ 1.92
SLX4Q8IY92 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
SLX4Q8IY92 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SLX4Q8IY92 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SLX4Q8IY92 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.06■■□□□ 1.92
SLX4Q8IY92 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC27.05■■□□□ 1.92
SLX4Q8IY92 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC27.05■■□□□ 1.92
SLX4Q8IY92 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.05■■□□□ 1.92
SLX4Q8IY92 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.05■■□□□ 1.92
SLX4Q8IY92 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SLX4Q8IY92 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SLX4Q8IY92 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC27.04■■□□□ 1.92
SLX4Q8IY92 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
SLX4Q8IY92 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC27.04■■□□□ 1.92
SLX4Q8IY92 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC27.04■■□□□ 1.92
SLX4Q8IY92 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms