Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00346Q8IVM7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 AL356740.2-201ENST00000601559 647 ntBASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.35■□□□□ 0.69
LINC00346Q8IVM7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 AC092053.2-201ENST00000640557 1818 ntBASIC19.34■□□□□ 0.69
LINC00346Q8IVM7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00346Q8IVM7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00346Q8IVM7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00346Q8IVM7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00346Q8IVM7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.33■□□□□ 0.69
LINC00346Q8IVM7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00346Q8IVM7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00346Q8IVM7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00346Q8IVM7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00346Q8IVM7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00346Q8IVM7 AC006455.2-201ENST00000429931 906 ntBASIC19.33■□□□□ 0.68
LINC00346Q8IVM7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00346Q8IVM7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.33■□□□□ 0.68
LINC00346Q8IVM7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00346Q8IVM7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LINC00346Q8IVM7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00346Q8IVM7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.32■□□□□ 0.68
LINC00346Q8IVM7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 MIR3621-201ENST00000580529 85 ntBASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 AL499627.2-201ENST00000606283 725 ntBASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.31■□□□□ 0.68
LINC00346Q8IVM7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.3■□□□□ 0.68
LINC00346Q8IVM7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms