Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Fam78bQ8BQN5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Fam78bQ8BQN5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fam78bQ8BQN5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fam78bQ8BQN5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fam78bQ8BQN5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Fam78bQ8BQN5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fam78bQ8BQN5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Fam78bQ8BQN5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fam78bQ8BQN5 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.53■□□□□ 0.08
Fam78bQ8BQN5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Fam78bQ8BQN5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Fam78bQ8BQN5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Fam78bQ8BQN5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Fam78bQ8BQN5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Fam78bQ8BQN5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Fam78bQ8BQN5 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fam78bQ8BQN5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Fam78bQ8BQN5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam78bQ8BQN5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam78bQ8BQN5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam78bQ8BQN5 Gm13238-201ENSMUST00000117655 780 ntBASIC15.49■□□□□ 0.07
Fam78bQ8BQN5 Gm43566-201ENSMUST00000196851 808 ntBASIC15.49■□□□□ 0.07
Fam78bQ8BQN5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam78bQ8BQN5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Fam78bQ8BQN5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam78bQ8BQN5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Fam78bQ8BQN5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Fam78bQ8BQN5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fam78bQ8BQN5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam78bQ8BQN5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam78bQ8BQN5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Fam78bQ8BQN5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam78bQ8BQN5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.48■□□□□ 0.07
Fam78bQ8BQN5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fam78bQ8BQN5 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms