Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf18Q8BM39 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf18Q8BM39 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf18Q8BM39 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.42■□□□□ 0.54
Prpf18Q8BM39 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf18Q8BM39 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf18Q8BM39 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf18Q8BM39 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf18Q8BM39 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf18Q8BM39 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf18Q8BM39 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Gm40881-201ENSMUST00000223397 166 ntBASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.41■□□□□ 0.54
Prpf18Q8BM39 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf18Q8BM39 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Prpf18Q8BM39 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Prpf18Q8BM39 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf18Q8BM39 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Prpf18Q8BM39 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Prpf18Q8BM39 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf18Q8BM39 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf18Q8BM39 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf18Q8BM39 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf18Q8BM39 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf18Q8BM39 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf18Q8BM39 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Prpf18Q8BM39 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf18Q8BM39 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms