Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Zc3hc1Q80YV2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Zc3hc1Q80YV2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Zc3hc1Q80YV2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
Zc3hc1Q80YV2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 Etf1-202ENSMUST00000180351 108 ntBASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Zc3hc1Q80YV2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3hc1Q80YV2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3hc1Q80YV2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Zc3hc1Q80YV2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Zc3hc1Q80YV2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3hc1Q80YV2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Zc3hc1Q80YV2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Zc3hc1Q80YV2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 AA386476-201ENSMUST00000098781 1665 ntBASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Zc3hc1Q80YV2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zc3hc1Q80YV2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Zc3hc1Q80YV2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zc3hc1Q80YV2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Zc3hc1Q80YV2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.67■□□□□ 0.42
Zc3hc1Q80YV2 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.67■□□□□ 0.42
Zc3hc1Q80YV2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Zc3hc1Q80YV2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms