Protein–RNA interactions for Protein: Q61644

Pacsin1, Protein kinase C and casein kinase substrate in neurons protein 1, mousemouse

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacsin1Q61644 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.87■□□□□ 0.93
Pacsin1Q61644 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.87■□□□□ 0.93
Pacsin1Q61644 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pacsin1Q61644 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pacsin1Q61644 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pacsin1Q61644 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
Pacsin1Q61644 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pacsin1Q61644 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pacsin1Q61644 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pacsin1Q61644 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pacsin1Q61644 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pacsin1Q61644 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pacsin1Q61644 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Pacsin1Q61644 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pacsin1Q61644 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pacsin1Q61644 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pacsin1Q61644 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pacsin1Q61644 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pacsin1Q61644 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pacsin1Q61644 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.84■□□□□ 0.93
Pacsin1Q61644 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pacsin1Q61644 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pacsin1Q61644 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pacsin1Q61644 Gm12821-201ENSMUST00000120022 600 ntBASIC20.84■□□□□ 0.93
Pacsin1Q61644 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pacsin1Q61644 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.84■□□□□ 0.93
Pacsin1Q61644 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pacsin1Q61644 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pacsin1Q61644 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Pacsin1Q61644 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pacsin1Q61644 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pacsin1Q61644 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pacsin1Q61644 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pacsin1Q61644 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Pacsin1Q61644 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pacsin1Q61644 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.83■□□□□ 0.93
Pacsin1Q61644 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.83■□□□□ 0.93
Pacsin1Q61644 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.83■□□□□ 0.93
Pacsin1Q61644 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pacsin1Q61644 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pacsin1Q61644 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pacsin1Q61644 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Gm27454-201ENSMUST00000185090 204 ntBASIC20.82■□□□□ 0.92
Pacsin1Q61644 Gm43137-201ENSMUST00000198052 594 ntBASIC20.82■□□□□ 0.92
Pacsin1Q61644 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pacsin1Q61644 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pacsin1Q61644 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pacsin1Q61644 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pacsin1Q61644 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.81■□□□□ 0.92
Pacsin1Q61644 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pacsin1Q61644 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pacsin1Q61644 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pacsin1Q61644 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.81■□□□□ 0.92
Pacsin1Q61644 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.81■□□□□ 0.92
Pacsin1Q61644 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pacsin1Q61644 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pacsin1Q61644 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pacsin1Q61644 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pacsin1Q61644 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.8■□□□□ 0.92
Pacsin1Q61644 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Golph3-205ENSMUST00000228671 2842 ntBASIC20.8■□□□□ 0.92
Pacsin1Q61644 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pacsin1Q61644 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pacsin1Q61644 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pacsin1Q61644 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pacsin1Q61644 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pacsin1Q61644 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pacsin1Q61644 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pacsin1Q61644 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.79■□□□□ 0.92
Pacsin1Q61644 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.79■□□□□ 0.92
Pacsin1Q61644 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.79■□□□□ 0.92
Pacsin1Q61644 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pacsin1Q61644 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pacsin1Q61644 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.78■□□□□ 0.92
Pacsin1Q61644 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pacsin1Q61644 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pacsin1Q61644 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pacsin1Q61644 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pacsin1Q61644 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms