Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC39.34■■■■□ 3.89
HMGXB3Q12766 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC39.34■■■■□ 3.89
HMGXB3Q12766 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC39.33■■■■□ 3.89
HMGXB3Q12766 PRORSD1P-201ENST00000295112 541 ntBASIC39.33■■■■□ 3.89
HMGXB3Q12766 UQCRFS1P1-201ENST00000435169 820 ntBASIC39.33■■■■□ 3.89
HMGXB3Q12766 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC39.33■■■■□ 3.89
HMGXB3Q12766 AC087239.1-201ENST00000622671 572 ntBASIC39.33■■■■□ 3.89
HMGXB3Q12766 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
HMGXB3Q12766 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC39.33■■■■□ 3.89
HMGXB3Q12766 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC39.32■■■■□ 3.89
HMGXB3Q12766 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC39.32■■■■□ 3.89
HMGXB3Q12766 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
HMGXB3Q12766 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC39.32■■■■□ 3.89
HMGXB3Q12766 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC39.32■■■■□ 3.89
HMGXB3Q12766 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
HMGXB3Q12766 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC39.32■■■■□ 3.88
HMGXB3Q12766 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
HMGXB3Q12766 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
HMGXB3Q12766 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
HMGXB3Q12766 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
HMGXB3Q12766 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC39.31■■■■□ 3.88
HMGXB3Q12766 AC005224.4-201ENST00000583262 1652 ntBASIC39.31■■■■□ 3.88
HMGXB3Q12766 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
HMGXB3Q12766 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
HMGXB3Q12766 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
HMGXB3Q12766 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
HMGXB3Q12766 BRI3-207ENST00000539286 699 ntTSL 2 BASIC39.3■■■■□ 3.88
HMGXB3Q12766 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC39.3■■■■□ 3.88
HMGXB3Q12766 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC39.3■■■■□ 3.88
HMGXB3Q12766 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
HMGXB3Q12766 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC39.3■■■■□ 3.88
HMGXB3Q12766 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC39.3■■■■□ 3.88
HMGXB3Q12766 AF201337.1-201ENST00000520239 748 ntBASIC39.3■■■■□ 3.88
HMGXB3Q12766 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
HMGXB3Q12766 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
HMGXB3Q12766 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
HMGXB3Q12766 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC39.29■■■■□ 3.88
HMGXB3Q12766 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC39.28■■■■□ 3.88
HMGXB3Q12766 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
HMGXB3Q12766 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC39.28■■■■□ 3.88
HMGXB3Q12766 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC39.28■■■■□ 3.88
HMGXB3Q12766 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC39.27■■■■□ 3.88
HMGXB3Q12766 RPS2P52-201ENST00000469610 820 ntBASIC39.27■■■■□ 3.88
HMGXB3Q12766 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC39.27■■■■□ 3.88
HMGXB3Q12766 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
HMGXB3Q12766 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC39.26■■■■□ 3.88
HMGXB3Q12766 ARL16-209ENST00000573715 763 ntTSL 3 BASIC39.26■■■■□ 3.88
HMGXB3Q12766 ARL16-211ENST00000576135 694 ntTSL 3 BASIC39.26■■■■□ 3.88
HMGXB3Q12766 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC39.26■■■■□ 3.88
HMGXB3Q12766 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC39.26■■■■□ 3.88
HMGXB3Q12766 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC39.26■■■■□ 3.87
HMGXB3Q12766 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC39.25■■■■□ 3.87
HMGXB3Q12766 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC39.25■■■■□ 3.87
HMGXB3Q12766 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC39.25■■■■□ 3.87
HMGXB3Q12766 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
HMGXB3Q12766 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
HMGXB3Q12766 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
HMGXB3Q12766 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC39.25■■■■□ 3.87
HMGXB3Q12766 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
HMGXB3Q12766 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
HMGXB3Q12766 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC39.24■■■■□ 3.87
HMGXB3Q12766 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC39.24■■■■□ 3.87
HMGXB3Q12766 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC39.24■■■■□ 3.87
HMGXB3Q12766 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
HMGXB3Q12766 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
HMGXB3Q12766 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC39.24■■■■□ 3.87
HMGXB3Q12766 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC39.23■■■■□ 3.87
HMGXB3Q12766 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC39.23■■■■□ 3.87
HMGXB3Q12766 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC39.23■■■■□ 3.87
HMGXB3Q12766 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
HMGXB3Q12766 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC39.22■■■■□ 3.87
HMGXB3Q12766 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC39.22■■■■□ 3.87
HMGXB3Q12766 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
HMGXB3Q12766 MARS-234ENST00000630571 216 ntTSL 5 BASIC39.22■■■■□ 3.87
HMGXB3Q12766 MARS-235ENST00000630803 183 ntTSL 3 BASIC39.22■■■■□ 3.87
HMGXB3Q12766 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
HMGXB3Q12766 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
HMGXB3Q12766 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC39.21■■■■□ 3.87
HMGXB3Q12766 TMEM202-AS1-202ENST00000565181 2325 ntBASIC39.21■■■■□ 3.87
HMGXB3Q12766 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC39.21■■■■□ 3.87
HMGXB3Q12766 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC39.2■■■■□ 3.87
HMGXB3Q12766 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC39.2■■■■□ 3.87
HMGXB3Q12766 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
HMGXB3Q12766 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
HMGXB3Q12766 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC39.2■■■■□ 3.87
HMGXB3Q12766 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
HMGXB3Q12766 AC004687.1-201ENST00000579003 1625 ntBASIC39.2■■■■□ 3.87
HMGXB3Q12766 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC39.19■■■■□ 3.86
HMGXB3Q12766 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC39.19■■■■□ 3.86
HMGXB3Q12766 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC39.19■■■■□ 3.86
HMGXB3Q12766 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
HMGXB3Q12766 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
HMGXB3Q12766 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
HMGXB3Q12766 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC39.18■■■■□ 3.86
HMGXB3Q12766 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
HMGXB3Q12766 SLC7A5P1-201ENST00000568957 537 ntBASIC39.18■■■■□ 3.86
HMGXB3Q12766 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
HMGXB3Q12766 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC39.18■■■■□ 3.86
HMGXB3Q12766 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
HMGXB3Q12766 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC39.17■■■■□ 3.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms