Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sssca1P56873 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.69■□□□□ 0.1
Sssca1P56873 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sssca1P56873 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sssca1P56873 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sssca1P56873 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sssca1P56873 Gm43530-201ENSMUST00000195920 274 ntBASIC15.69■□□□□ 0.1
Sssca1P56873 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sssca1P56873 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sssca1P56873 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sssca1P56873 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sssca1P56873 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sssca1P56873 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sssca1P56873 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.68■□□□□ 0.1
Sssca1P56873 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Sssca1P56873 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sssca1P56873 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sssca1P56873 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sssca1P56873 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sssca1P56873 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sssca1P56873 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sssca1P56873 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sssca1P56873 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sssca1P56873 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sssca1P56873 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sssca1P56873 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sssca1P56873 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sssca1P56873 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Sssca1P56873 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sssca1P56873 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sssca1P56873 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sssca1P56873 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sssca1P56873 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sssca1P56873 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sssca1P56873 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sssca1P56873 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sssca1P56873 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sssca1P56873 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.66■□□□□ 0.1
Sssca1P56873 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sssca1P56873 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sssca1P56873 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sssca1P56873 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.66■□□□□ 0.1
Sssca1P56873 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sssca1P56873 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sssca1P56873 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sssca1P56873 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sssca1P56873 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sssca1P56873 Golph3-205ENSMUST00000228671 2842 ntBASIC15.64■□□□□ 0.09
Sssca1P56873 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.64■□□□□ 0.09
Sssca1P56873 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sssca1P56873 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.64■□□□□ 0.09
Sssca1P56873 Gm9870-201ENSMUST00000063874 645 ntBASIC15.64■□□□□ 0.09
Sssca1P56873 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sssca1P56873 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sssca1P56873 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sssca1P56873 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sssca1P56873 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sssca1P56873 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sssca1P56873 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sssca1P56873 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.63■□□□□ 0.09
Sssca1P56873 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.63■□□□□ 0.09
Sssca1P56873 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.63■□□□□ 0.09
Sssca1P56873 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.63■□□□□ 0.09
Sssca1P56873 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Sssca1P56873 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sssca1P56873 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sssca1P56873 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Sssca1P56873 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sssca1P56873 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sssca1P56873 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sssca1P56873 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sssca1P56873 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Sssca1P56873 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
Sssca1P56873 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sssca1P56873 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sssca1P56873 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sssca1P56873 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sssca1P56873 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms