Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PTPN6P29350 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN6P29350 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPN6P29350 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPN6P29350 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.81■□□□□ 0.92
PTPN6P29350 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PTPN6P29350 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN6P29350 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN6P29350 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN6P29350 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
PTPN6P29350 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN6P29350 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN6P29350 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PTPN6P29350 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PTPN6P29350 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PTPN6P29350 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN6P29350 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN6P29350 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN6P29350 AC131281.2-201ENST00000520478 145 ntBASIC20.79■□□□□ 0.92
PTPN6P29350 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN6P29350 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PTPN6P29350 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.79■□□□□ 0.92
PTPN6P29350 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PTPN6P29350 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN6P29350 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN6P29350 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PTPN6P29350 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PTPN6P29350 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN6P29350 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.78■□□□□ 0.92
PTPN6P29350 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN6P29350 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTPN6P29350 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.78■□□□□ 0.92
PTPN6P29350 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.78■□□□□ 0.92
PTPN6P29350 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN6P29350 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPN6P29350 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN6P29350 AC008406.3-201ENST00000620001 1374 ntBASIC20.77■□□□□ 0.92
PTPN6P29350 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN6P29350 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN6P29350 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN6P29350 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.77■□□□□ 0.92
PTPN6P29350 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN6P29350 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN6P29350 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.77■□□□□ 0.92
PTPN6P29350 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPN6P29350 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.77■□□□□ 0.92
PTPN6P29350 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN6P29350 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTPN6P29350 LINC01960-201ENST00000563759 1884 ntBASIC20.77■□□□□ 0.92
PTPN6P29350 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
PTPN6P29350 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN6P29350 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PTPN6P29350 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.77■□□□□ 0.91
PTPN6P29350 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN6P29350 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN6P29350 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN6P29350 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.76■□□□□ 0.91
PTPN6P29350 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN6P29350 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN6P29350 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.76■□□□□ 0.91
PTPN6P29350 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN6P29350 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PTPN6P29350 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTPN6P29350 FBXW4P1-201ENST00000426721 2239 ntBASIC20.76■□□□□ 0.91
PTPN6P29350 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.76■□□□□ 0.91
PTPN6P29350 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN6P29350 AC009102.2-201ENST00000606772 1639 ntBASIC20.75■□□□□ 0.91
PTPN6P29350 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.75■□□□□ 0.91
PTPN6P29350 AL512631.2-201ENST00000604634 923 ntBASIC20.75■□□□□ 0.91
PTPN6P29350 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.75■□□□□ 0.91
PTPN6P29350 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTPN6P29350 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PTPN6P29350 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PTPN6P29350 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PTPN6P29350 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.74■□□□□ 0.91
PTPN6P29350 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 AC009086.3-201ENST00000623486 1008 ntBASIC20.74■□□□□ 0.91
PTPN6P29350 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.74■□□□□ 0.91
PTPN6P29350 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.74■□□□□ 0.91
PTPN6P29350 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTPN6P29350 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms