Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC241377.3-202ENST00000626088 1088 ntBASIC18.92■□□□□ 0.62
CCL1P22362 AC241585.3-202ENST00000628937 1088 ntBASIC18.92■□□□□ 0.62
CCL1P22362 AC245100.8-202ENST00000629247 1058 ntBASIC18.92■□□□□ 0.62
CCL1P22362 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCL1P22362 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
CCL1P22362 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.92■□□□□ 0.62
CCL1P22362 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.92■□□□□ 0.62
CCL1P22362 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL1P22362 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.91■□□□□ 0.62
CCL1P22362 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL1P22362 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL1P22362 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.91■□□□□ 0.62
CCL1P22362 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCL1P22362 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.91■□□□□ 0.62
CCL1P22362 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCL1P22362 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.91■□□□□ 0.62
CCL1P22362 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL1P22362 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL1P22362 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL1P22362 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL1P22362 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCL1P22362 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL1P22362 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.9■□□□□ 0.62
CCL1P22362 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCL1P22362 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.9■□□□□ 0.62
CCL1P22362 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL1P22362 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCL1P22362 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.9■□□□□ 0.62
CCL1P22362 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.9■□□□□ 0.62
CCL1P22362 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL1P22362 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCL1P22362 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CCL1P22362 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.9■□□□□ 0.62
CCL1P22362 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.9■□□□□ 0.62
CCL1P22362 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL1P22362 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.9■□□□□ 0.62
CCL1P22362 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL1P22362 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL1P22362 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL1P22362 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCL1P22362 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCL1P22362 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCL1P22362 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.89■□□□□ 0.61
CCL1P22362 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CCL1P22362 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL1P22362 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCL1P22362 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.89■□□□□ 0.61
CCL1P22362 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL1P22362 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CCL1P22362 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCL1P22362 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCL1P22362 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCL1P22362 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL1P22362 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.88■□□□□ 0.61
CCL1P22362 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCL1P22362 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.88■□□□□ 0.61
CCL1P22362 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CCL1P22362 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCL1P22362 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.88■□□□□ 0.61
CCL1P22362 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCL1P22362 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCL1P22362 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCL1P22362 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL1P22362 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCL1P22362 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCL1P22362 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
CCL1P22362 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCL1P22362 FBXW4P1-201ENST00000426721 2239 ntBASIC18.87■□□□□ 0.61
CCL1P22362 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL1P22362 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL1P22362 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.87■□□□□ 0.61
CCL1P22362 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCL1P22362 AL031602.1-201ENST00000633169 911 ntBASIC18.87■□□□□ 0.61
CCL1P22362 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCL1P22362 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL1P22362 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL1P22362 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL1P22362 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL1P22362 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL1P22362 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL1P22362 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL1P22362 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL1P22362 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL1P22362 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.86■□□□□ 0.61
CCL1P22362 KRT16P3-201ENST00000439127 1283 ntBASIC18.86■□□□□ 0.61
CCL1P22362 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL1P22362 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCL1P22362 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCL1P22362 AC010542.4-201ENST00000563151 1910 ntBASIC18.86■□□□□ 0.61
CCL1P22362 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.86■□□□□ 0.61
CCL1P22362 AC007375.3-201ENST00000600936 2314 ntBASIC18.85■□□□□ 0.61
CCL1P22362 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCL1P22362 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.85■□□□□ 0.61
CCL1P22362 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.85■□□□□ 0.61
CCL1P22362 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms