Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LAMP1P11279 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMP1P11279 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMP1P11279 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LAMP1P11279 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LAMP1P11279 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LAMP1P11279 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
LAMP1P11279 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.77■□□□□ 0.92
LAMP1P11279 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LAMP1P11279 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
LAMP1P11279 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LAMP1P11279 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.77■□□□□ 0.92
LAMP1P11279 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.77■□□□□ 0.92
LAMP1P11279 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.77■□□□□ 0.92
LAMP1P11279 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.77■□□□□ 0.92
LAMP1P11279 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
LAMP1P11279 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
LAMP1P11279 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
LAMP1P11279 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.77■□□□□ 0.91
LAMP1P11279 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.77■□□□□ 0.91
LAMP1P11279 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LAMP1P11279 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LAMP1P11279 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LAMP1P11279 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LAMP1P11279 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.76■□□□□ 0.91
LAMP1P11279 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LAMP1P11279 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.76■□□□□ 0.91
LAMP1P11279 AL499627.2-201ENST00000606283 725 ntBASIC20.76■□□□□ 0.91
LAMP1P11279 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LAMP1P11279 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LAMP1P11279 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.76■□□□□ 0.91
LAMP1P11279 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LAMP1P11279 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LAMP1P11279 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.75■□□□□ 0.91
LAMP1P11279 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LAMP1P11279 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.75■□□□□ 0.91
LAMP1P11279 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.75■□□□□ 0.91
LAMP1P11279 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LAMP1P11279 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LAMP1P11279 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LAMP1P11279 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LAMP1P11279 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMP1P11279 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LAMP1P11279 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMP1P11279 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LAMP1P11279 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMP1P11279 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMP1P11279 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMP1P11279 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.74■□□□□ 0.91
LAMP1P11279 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.74■□□□□ 0.91
LAMP1P11279 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LAMP1P11279 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
LAMP1P11279 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMP1P11279 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LAMP1P11279 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
LAMP1P11279 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LAMP1P11279 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
LAMP1P11279 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.73■□□□□ 0.91
LAMP1P11279 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LAMP1P11279 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.73■□□□□ 0.91
LAMP1P11279 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LAMP1P11279 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LAMP1P11279 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LAMP1P11279 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LAMP1P11279 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.72■□□□□ 0.91
LAMP1P11279 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
LAMP1P11279 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMP1P11279 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.72■□□□□ 0.91
LAMP1P11279 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LAMP1P11279 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMP1P11279 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.72■□□□□ 0.91
LAMP1P11279 GUSBP5-201ENST00000418136 578 ntBASIC20.72■□□□□ 0.91
LAMP1P11279 CA15P2-201ENST00000611168 834 ntBASIC20.72■□□□□ 0.91
LAMP1P11279 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMP1P11279 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.72■□□□□ 0.91
LAMP1P11279 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMP1P11279 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMP1P11279 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LAMP1P11279 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.72■□□□□ 0.91
LAMP1P11279 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMP1P11279 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMP1P11279 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMP1P11279 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMP1P11279 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMP1P11279 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.71■□□□□ 0.91
LAMP1P11279 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LAMP1P11279 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.71■□□□□ 0.91
LAMP1P11279 AC241377.3-202ENST00000626088 1088 ntBASIC20.71■□□□□ 0.91
LAMP1P11279 AC241585.3-202ENST00000628937 1088 ntBASIC20.71■□□□□ 0.91
LAMP1P11279 AC245100.8-202ENST00000629247 1058 ntBASIC20.71■□□□□ 0.91
LAMP1P11279 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMP1P11279 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.71■□□□□ 0.91
LAMP1P11279 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.71■□□□□ 0.91
LAMP1P11279 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.71■□□□□ 0.91
LAMP1P11279 AC007375.3-201ENST00000600936 2314 ntBASIC20.71■□□□□ 0.91
LAMP1P11279 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LAMP1P11279 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LAMP1P11279 FBXW4P1-201ENST00000426721 2239 ntBASIC20.7■□□□□ 0.9
LAMP1P11279 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LAMP1P11279 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms