Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.35■□□□□ 0.05
Pde6dO55057 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pde6dO55057 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pde6dO55057 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pde6dO55057 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.35■□□□□ 0.05
Pde6dO55057 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pde6dO55057 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pde6dO55057 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pde6dO55057 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pde6dO55057 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pde6dO55057 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.35■□□□□ 0.05
Pde6dO55057 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Pde6dO55057 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pde6dO55057 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pde6dO55057 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.35■□□□□ 0.05
Pde6dO55057 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pde6dO55057 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pde6dO55057 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pde6dO55057 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Pde6dO55057 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pde6dO55057 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pde6dO55057 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pde6dO55057 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.34■□□□□ 0.05
Pde6dO55057 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.33■□□□□ 0.05
Pde6dO55057 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pde6dO55057 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pde6dO55057 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pde6dO55057 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pde6dO55057 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6dO55057 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6dO55057 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6dO55057 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6dO55057 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6dO55057 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6dO55057 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6dO55057 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pde6dO55057 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6dO55057 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6dO55057 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6dO55057 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6dO55057 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pde6dO55057 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6dO55057 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pde6dO55057 Gm16437-201ENSMUST00000025669 507 ntBASIC15.32■□□□□ 0.04
Pde6dO55057 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6dO55057 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Pde6dO55057 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6dO55057 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.32■□□□□ 0.04
Pde6dO55057 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6dO55057 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6dO55057 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6dO55057 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.32■□□□□ 0.04
Pde6dO55057 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6dO55057 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6dO55057 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6dO55057 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6dO55057 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6dO55057 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6dO55057 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pde6dO55057 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.31■□□□□ 0.04
Pde6dO55057 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.31■□□□□ 0.04
Pde6dO55057 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6dO55057 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6dO55057 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pde6dO55057 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6dO55057 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pde6dO55057 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pde6dO55057 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pde6dO55057 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 Scarna2-201ENSMUST00000157560 414 ntBASIC15.3■□□□□ 0.04
Pde6dO55057 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pde6dO55057 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6dO55057 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Pde6dO55057 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6dO55057 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6dO55057 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6dO55057 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6dO55057 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6dO55057 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pde6dO55057 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6dO55057 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.29■□□□□ 0.04
Pde6dO55057 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6dO55057 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6dO55057 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pde6dO55057 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pde6dO55057 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pde6dO55057 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pde6dO55057 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pde6dO55057 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms