Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcn6O35454 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn6O35454 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Clcn6O35454 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.37■□□□□ 0.85
Clcn6O35454 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn6O35454 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.37■□□□□ 0.85
Clcn6O35454 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn6O35454 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn6O35454 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn6O35454 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn6O35454 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn6O35454 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcn6O35454 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn6O35454 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Clcn6O35454 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn6O35454 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn6O35454 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn6O35454 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn6O35454 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.36■□□□□ 0.85
Clcn6O35454 AC132260.2-201ENSMUST00000224482 344 ntBASIC20.36■□□□□ 0.85
Clcn6O35454 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.36■□□□□ 0.85
Clcn6O35454 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Clcn6O35454 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Clcn6O35454 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn6O35454 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn6O35454 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Clcn6O35454 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn6O35454 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn6O35454 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcn6O35454 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
Clcn6O35454 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.35■□□□□ 0.85
Clcn6O35454 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcn6O35454 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Clcn6O35454 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn6O35454 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn6O35454 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.34■□□□□ 0.85
Clcn6O35454 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Clcn6O35454 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn6O35454 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.34■□□□□ 0.85
Clcn6O35454 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn6O35454 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcn6O35454 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn6O35454 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn6O35454 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn6O35454 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn6O35454 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcn6O35454 AC140209.1-201ENSMUST00000227875 284 ntBASIC20.33■□□□□ 0.85
Clcn6O35454 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.33■□□□□ 0.85
Clcn6O35454 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clcn6O35454 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clcn6O35454 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clcn6O35454 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clcn6O35454 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Clcn6O35454 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Clcn6O35454 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn6O35454 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn6O35454 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn6O35454 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.32■□□□□ 0.84
Clcn6O35454 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.32■□□□□ 0.84
Clcn6O35454 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Clcn6O35454 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn6O35454 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.32■□□□□ 0.84
Clcn6O35454 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn6O35454 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcn6O35454 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn6O35454 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn6O35454 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn6O35454 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn6O35454 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Clcn6O35454 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn6O35454 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.31■□□□□ 0.84
Clcn6O35454 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn6O35454 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn6O35454 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn6O35454 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn6O35454 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcn6O35454 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn6O35454 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn6O35454 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn6O35454 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn6O35454 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Clcn6O35454 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn6O35454 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcn6O35454 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clcn6O35454 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms