Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC31.04■■■□□ 2.56
CHD2O14647 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHD2O14647 AC004687.1-201ENST00000579003 1625 ntBASIC31.04■■■□□ 2.56
CHD2O14647 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHD2O14647 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.04■■■□□ 2.56
CHD2O14647 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC31.04■■■□□ 2.56
CHD2O14647 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
CHD2O14647 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHD2O14647 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHD2O14647 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CHD2O14647 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
CHD2O14647 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD2O14647 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
CHD2O14647 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CHD2O14647 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.03■■■□□ 2.56
CHD2O14647 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD2O14647 AC005224.4-201ENST00000583262 1652 ntBASIC31.03■■■□□ 2.56
CHD2O14647 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
CHD2O14647 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
CHD2O14647 AC007322.1-201ENST00000426983 750 ntBASIC31.03■■■□□ 2.56
CHD2O14647 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.03■■■□□ 2.56
CHD2O14647 AC010141.3-201ENST00000456659 717 ntBASIC31.03■■■□□ 2.56
CHD2O14647 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC31.03■■■□□ 2.56
CHD2O14647 TBCB-214ENST00000629269 413 ntTSL 5 BASIC31.03■■■□□ 2.56
CHD2O14647 AC145676.1-201ENST00000514988 2004 ntBASIC31.02■■■□□ 2.56
CHD2O14647 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHD2O14647 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC31.02■■■□□ 2.56
CHD2O14647 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CHD2O14647 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
CHD2O14647 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.01■■■□□ 2.56
CHD2O14647 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.01■■■□□ 2.56
CHD2O14647 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC31.01■■■□□ 2.55
CHD2O14647 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHD2O14647 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CHD2O14647 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC31.01■■■□□ 2.55
CHD2O14647 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.01■■■□□ 2.55
CHD2O14647 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.01■■■□□ 2.55
CHD2O14647 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHD2O14647 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31■■■□□ 2.55
CHD2O14647 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CHD2O14647 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31■■■□□ 2.55
CHD2O14647 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC31■■■□□ 2.55
CHD2O14647 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC31■■■□□ 2.55
CHD2O14647 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC30.99■■■□□ 2.55
CHD2O14647 ITM2C-210ENST00000620962 501 ntBASIC30.99■■■□□ 2.55
CHD2O14647 AF201337.1-201ENST00000520239 748 ntBASIC30.98■■■□□ 2.55
CHD2O14647 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC30.98■■■□□ 2.55
CHD2O14647 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
CHD2O14647 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC30.98■■■□□ 2.55
CHD2O14647 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC30.98■■■□□ 2.55
CHD2O14647 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHD2O14647 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC30.98■■■□□ 2.55
CHD2O14647 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC30.98■■■□□ 2.55
CHD2O14647 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
CHD2O14647 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CHD2O14647 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
CHD2O14647 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CHD2O14647 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
CHD2O14647 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC30.97■■■□□ 2.55
CHD2O14647 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHD2O14647 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CHD2O14647 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CHD2O14647 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CHD2O14647 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CHD2O14647 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.96■■■□□ 2.55
CHD2O14647 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CHD2O14647 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CHD2O14647 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC30.96■■■□□ 2.55
CHD2O14647 AC079630.1-202ENST00000618127 1840 ntBASIC30.95■■■□□ 2.55
CHD2O14647 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
CHD2O14647 POU5F1P3-201ENST00000428824 1078 ntBASIC30.95■■■□□ 2.55
CHD2O14647 FAM201B-201ENST00000458407 597 ntBASIC30.95■■■□□ 2.55
CHD2O14647 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
CHD2O14647 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
CHD2O14647 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
CHD2O14647 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.94■■■□□ 2.54
CHD2O14647 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC30.94■■■□□ 2.54
CHD2O14647 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CHD2O14647 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
CHD2O14647 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHD2O14647 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CHD2O14647 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CHD2O14647 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CHD2O14647 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHD2O14647 AP003733.4-201ENST00000623785 1697 ntBASIC30.93■■■□□ 2.54
CHD2O14647 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CHD2O14647 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHD2O14647 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHD2O14647 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHD2O14647 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC30.93■■■□□ 2.54
CHD2O14647 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CHD2O14647 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHD2O14647 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD2O14647 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD2O14647 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD2O14647 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC30.92■■■□□ 2.54
CHD2O14647 AC133552.2-202ENST00000575694 574 ntBASIC30.92■■■□□ 2.54
CHD2O14647 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CHD2O14647 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
CHD2O14647 PFKL-212ENST00000628044 129 ntTSL 3 BASIC30.91■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms