Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.19■□□□□ 0.82
CPSF4LA6NMK7 AC004687.1-201ENST00000579003 1625 ntBASIC20.19■□□□□ 0.82
CPSF4LA6NMK7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF4LA6NMK7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CPSF4LA6NMK7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF4LA6NMK7 C11orf96-202ENST00000528572 1834 ntBASIC20.18■□□□□ 0.82
CPSF4LA6NMK7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF4LA6NMK7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.18■□□□□ 0.82
CPSF4LA6NMK7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF4LA6NMK7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CPSF4LA6NMK7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CPSF4LA6NMK7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CPSF4LA6NMK7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF4LA6NMK7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPSF4LA6NMK7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CPSF4LA6NMK7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.17■□□□□ 0.82
CPSF4LA6NMK7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 AC137767.1-201ENST00000602918 1920 ntBASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 C17orf82-201ENST00000623772 1530 ntBASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF4LA6NMK7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CPSF4LA6NMK7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CPSF4LA6NMK7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPSF4LA6NMK7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF4LA6NMK7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF4LA6NMK7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF4LA6NMK7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF4LA6NMK7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF4LA6NMK7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CPSF4LA6NMK7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF4LA6NMK7 UNC93B8-201ENST00000511903 705 ntBASIC20.14■□□□□ 0.81
CPSF4LA6NMK7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.14■□□□□ 0.81
CPSF4LA6NMK7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF4LA6NMK7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.13■□□□□ 0.81
CPSF4LA6NMK7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF4LA6NMK7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms